Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Ccdc87Q8CDL9 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc87Q8CDL9 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc87Q8CDL9 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc87Q8CDL9 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc87Q8CDL9 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC14.16□□□□□ -0.14
Ccdc87Q8CDL9 Gm15487-201ENSMUST00000122373 465 ntBASIC14.16□□□□□ -0.14
Ccdc87Q8CDL9 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Ccdc87Q8CDL9 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.16□□□□□ -0.14
Ccdc87Q8CDL9 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc87Q8CDL9 Gm3436-201ENSMUST00000179930 840 ntBASIC14.16□□□□□ -0.14
Ccdc87Q8CDL9 Gm33320-201ENSMUST00000192232 530 ntBASIC14.16□□□□□ -0.14
Ccdc87Q8CDL9 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Ccdc87Q8CDL9 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ccdc87Q8CDL9 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc87Q8CDL9 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ccdc87Q8CDL9 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc87Q8CDL9 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc87Q8CDL9 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc87Q8CDL9 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC14.16□□□□□ -0.14
Ccdc87Q8CDL9 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.16□□□□□ -0.14
Ccdc87Q8CDL9 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.16□□□□□ -0.14
Ccdc87Q8CDL9 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc87Q8CDL9 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc87Q8CDL9 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc87Q8CDL9 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc87Q8CDL9 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ccdc87Q8CDL9 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc87Q8CDL9 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ccdc87Q8CDL9 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ccdc87Q8CDL9 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc87Q8CDL9 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC14.15□□□□□ -0.14
Ccdc87Q8CDL9 AC125108.1-201ENSMUST00000218986 2330 ntBASIC14.15□□□□□ -0.14
Ccdc87Q8CDL9 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ccdc87Q8CDL9 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc87Q8CDL9 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc87Q8CDL9 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc87Q8CDL9 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc87Q8CDL9 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc87Q8CDL9 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc87Q8CDL9 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc87Q8CDL9 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc87Q8CDL9 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Ccdc87Q8CDL9 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Ccdc87Q8CDL9 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc87Q8CDL9 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Ccdc87Q8CDL9 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc87Q8CDL9 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.15□□□□□ -0.14
Ccdc87Q8CDL9 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.15□□□□□ -0.14
Ccdc87Q8CDL9 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc87Q8CDL9 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc87Q8CDL9 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc87Q8CDL9 Gm8927-201ENSMUST00000181978 981 ntBASIC14.15□□□□□ -0.14
Ccdc87Q8CDL9 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.15□□□□□ -0.14
Ccdc87Q8CDL9 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc87Q8CDL9 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc87Q8CDL9 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc87Q8CDL9 Gm3222-201ENSMUST00000071282 990 ntBASIC14.15□□□□□ -0.14
Ccdc87Q8CDL9 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc87Q8CDL9 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Ccdc87Q8CDL9 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ccdc87Q8CDL9 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc87Q8CDL9 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc87Q8CDL9 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc87Q8CDL9 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc87Q8CDL9 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ccdc87Q8CDL9 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc87Q8CDL9 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc87Q8CDL9 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc87Q8CDL9 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc87Q8CDL9 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc87Q8CDL9 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.15□□□□□ -0.14
Ccdc87Q8CDL9 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc87Q8CDL9 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc87Q8CDL9 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ccdc87Q8CDL9 AC154747.3-201ENSMUST00000224471 3470 ntBASIC14.14□□□□□ -0.15
Ccdc87Q8CDL9 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc87Q8CDL9 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc87Q8CDL9 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc87Q8CDL9 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc87Q8CDL9 Gm45643-201ENSMUST00000211364 1484 ntBASIC14.14□□□□□ -0.15
Ccdc87Q8CDL9 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc87Q8CDL9 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc87Q8CDL9 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc87Q8CDL9 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Ccdc87Q8CDL9 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc87Q8CDL9 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.14□□□□□ -0.15
Ccdc87Q8CDL9 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc87Q8CDL9 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.14□□□□□ -0.15
Ccdc87Q8CDL9 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Ccdc87Q8CDL9 Gm27838-201ENSMUST00000184829 128 ntBASIC14.14□□□□□ -0.15
Ccdc87Q8CDL9 Gm21470-201ENSMUST00000187680 696 ntBASIC14.14□□□□□ -0.15
Ccdc87Q8CDL9 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Ccdc87Q8CDL9 Gm43438-201ENSMUST00000198133 379 ntBASIC14.14□□□□□ -0.15
Ccdc87Q8CDL9 Gm43703-201ENSMUST00000200523 763 ntBASIC14.14□□□□□ -0.15
Ccdc87Q8CDL9 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.14□□□□□ -0.15
Ccdc87Q8CDL9 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.14□□□□□ -0.15
Ccdc87Q8CDL9 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.14□□□□□ -0.15
Ccdc87Q8CDL9 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.14□□□□□ -0.15
Ccdc87Q8CDL9 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms