Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps53Q8CCB4 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps53Q8CCB4 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Vps53Q8CCB4 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps53Q8CCB4 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps53Q8CCB4 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps53Q8CCB4 AC154262.2-201ENSMUST00000224310 2293 ntBASIC15.51■□□□□ 0.07
Vps53Q8CCB4 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps53Q8CCB4 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps53Q8CCB4 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Vps53Q8CCB4 AC139054.1-201ENSMUST00000226898 1598 ntBASIC15.51■□□□□ 0.07
Vps53Q8CCB4 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps53Q8CCB4 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps53Q8CCB4 Mup-ps23-201ENSMUST00000118063 630 ntBASIC15.51■□□□□ 0.07
Vps53Q8CCB4 Trav4d-2-201ENSMUST00000120914 335 ntBASIC15.51■□□□□ 0.07
Vps53Q8CCB4 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps53Q8CCB4 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC15.51■□□□□ 0.07
Vps53Q8CCB4 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Vps53Q8CCB4 Gm27486-201ENSMUST00000184923 80 ntBASIC15.51■□□□□ 0.07
Vps53Q8CCB4 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC15.51■□□□□ 0.07
Vps53Q8CCB4 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC15.51■□□□□ 0.07
Vps53Q8CCB4 Gm7067-201ENSMUST00000207698 1249 ntBASIC15.51■□□□□ 0.07
Vps53Q8CCB4 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps53Q8CCB4 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps53Q8CCB4 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Vps53Q8CCB4 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Vps53Q8CCB4 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Vps53Q8CCB4 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps53Q8CCB4 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC15.51■□□□□ 0.07
Vps53Q8CCB4 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps53Q8CCB4 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Vps53Q8CCB4 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps53Q8CCB4 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Vps53Q8CCB4 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps53Q8CCB4 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps53Q8CCB4 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC15.51■□□□□ 0.07
Vps53Q8CCB4 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC15.51■□□□□ 0.07
Vps53Q8CCB4 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps53Q8CCB4 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps53Q8CCB4 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Vps53Q8CCB4 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps53Q8CCB4 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps53Q8CCB4 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps53Q8CCB4 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps53Q8CCB4 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps53Q8CCB4 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC15.5■□□□□ 0.07
Vps53Q8CCB4 Gm14371-201ENSMUST00000138925 1518 ntBASIC15.5■□□□□ 0.07
Vps53Q8CCB4 Gm6198-201ENSMUST00000191337 2929 ntBASIC15.5■□□□□ 0.07
Vps53Q8CCB4 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC15.5■□□□□ 0.07
Vps53Q8CCB4 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Vps53Q8CCB4 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC15.5■□□□□ 0.07
Vps53Q8CCB4 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC15.5■□□□□ 0.07
Vps53Q8CCB4 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Vps53Q8CCB4 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC15.5■□□□□ 0.07
Vps53Q8CCB4 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Vps53Q8CCB4 AC110817.1-201ENSMUST00000225706 605 ntBASIC15.5■□□□□ 0.07
Vps53Q8CCB4 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps53Q8CCB4 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Vps53Q8CCB4 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Vps53Q8CCB4 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps53Q8CCB4 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Vps53Q8CCB4 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps53Q8CCB4 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Vps53Q8CCB4 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps53Q8CCB4 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps53Q8CCB4 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps53Q8CCB4 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps53Q8CCB4 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vps53Q8CCB4 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC15.49■□□□□ 0.07
Vps53Q8CCB4 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vps53Q8CCB4 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vps53Q8CCB4 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vps53Q8CCB4 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC15.49■□□□□ 0.07
Vps53Q8CCB4 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vps53Q8CCB4 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vps53Q8CCB4 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vps53Q8CCB4 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vps53Q8CCB4 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Vps53Q8CCB4 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Vps53Q8CCB4 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC15.49■□□□□ 0.07
Vps53Q8CCB4 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vps53Q8CCB4 Gm13385-201ENSMUST00000121089 220 ntBASIC15.49■□□□□ 0.07
Vps53Q8CCB4 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Vps53Q8CCB4 Gm18934-201ENSMUST00000216671 1044 ntBASIC15.49■□□□□ 0.07
Vps53Q8CCB4 AC125117.1-201ENSMUST00000228121 468 ntBASIC15.49■□□□□ 0.07
Vps53Q8CCB4 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Vps53Q8CCB4 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Vps53Q8CCB4 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vps53Q8CCB4 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC15.49■□□□□ 0.07
Vps53Q8CCB4 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vps53Q8CCB4 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC15.49■□□□□ 0.07
Vps53Q8CCB4 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vps53Q8CCB4 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Vps53Q8CCB4 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vps53Q8CCB4 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vps53Q8CCB4 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Vps53Q8CCB4 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vps53Q8CCB4 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vps53Q8CCB4 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Vps53Q8CCB4 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms