Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
Shisa4Q8CA71 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shisa4Q8CA71 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shisa4Q8CA71 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shisa4Q8CA71 Gm8798-201ENSMUST00000211877 1661 ntBASIC15.41■□□□□ 0.06
Shisa4Q8CA71 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Shisa4Q8CA71 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shisa4Q8CA71 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Shisa4Q8CA71 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shisa4Q8CA71 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shisa4Q8CA71 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shisa4Q8CA71 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC15.4■□□□□ 0.06
Shisa4Q8CA71 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shisa4Q8CA71 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Shisa4Q8CA71 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shisa4Q8CA71 Gm8706-201ENSMUST00000197372 1491 ntBASIC15.4■□□□□ 0.06
Shisa4Q8CA71 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Shisa4Q8CA71 CT009713.10-201ENSMUST00000225013 1986 ntBASIC15.4■□□□□ 0.06
Shisa4Q8CA71 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shisa4Q8CA71 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shisa4Q8CA71 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shisa4Q8CA71 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Shisa4Q8CA71 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC15.4■□□□□ 0.06
Shisa4Q8CA71 Gm37644-201ENSMUST00000192190 2270 ntBASIC15.4■□□□□ 0.06
Shisa4Q8CA71 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shisa4Q8CA71 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Shisa4Q8CA71 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Shisa4Q8CA71 Snord83b-201ENSMUST00000104546 94 ntBASIC15.4■□□□□ 0.06
Shisa4Q8CA71 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC15.4■□□□□ 0.06
Shisa4Q8CA71 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC15.4■□□□□ 0.06
Shisa4Q8CA71 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC15.4■□□□□ 0.06
Shisa4Q8CA71 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Shisa4Q8CA71 Gm16479-201ENSMUST00000121706 932 ntBASIC15.4■□□□□ 0.06
Shisa4Q8CA71 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC15.4■□□□□ 0.06
Shisa4Q8CA71 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC15.4■□□□□ 0.06
Shisa4Q8CA71 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Shisa4Q8CA71 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shisa4Q8CA71 Gm2824-203ENSMUST00000226189 1228 ntBASIC15.4■□□□□ 0.06
Shisa4Q8CA71 AC154276.1-201ENSMUST00000228874 1299 ntBASIC15.4■□□□□ 0.06
Shisa4Q8CA71 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Shisa4Q8CA71 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shisa4Q8CA71 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Shisa4Q8CA71 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC15.4■□□□□ 0.06
Shisa4Q8CA71 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Shisa4Q8CA71 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Shisa4Q8CA71 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Shisa4Q8CA71 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shisa4Q8CA71 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Shisa4Q8CA71 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Shisa4Q8CA71 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shisa4Q8CA71 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shisa4Q8CA71 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC15.39■□□□□ 0.05
Shisa4Q8CA71 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shisa4Q8CA71 AC137842.1-201ENSMUST00000227896 2064 ntBASIC15.39■□□□□ 0.05
Shisa4Q8CA71 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shisa4Q8CA71 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shisa4Q8CA71 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Shisa4Q8CA71 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shisa4Q8CA71 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shisa4Q8CA71 Mir686-201ENSMUST00000102174 109 ntBASIC15.39■□□□□ 0.05
Shisa4Q8CA71 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Shisa4Q8CA71 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shisa4Q8CA71 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shisa4Q8CA71 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shisa4Q8CA71 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Shisa4Q8CA71 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shisa4Q8CA71 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC15.39■□□□□ 0.05
Shisa4Q8CA71 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Shisa4Q8CA71 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Shisa4Q8CA71 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC15.39■□□□□ 0.05
Shisa4Q8CA71 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shisa4Q8CA71 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shisa4Q8CA71 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC15.39■□□□□ 0.05
Shisa4Q8CA71 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
Shisa4Q8CA71 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shisa4Q8CA71 Gm42928-201ENSMUST00000197338 3339 ntBASIC15.39■□□□□ 0.05
Shisa4Q8CA71 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shisa4Q8CA71 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shisa4Q8CA71 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shisa4Q8CA71 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Shisa4Q8CA71 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shisa4Q8CA71 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shisa4Q8CA71 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Shisa4Q8CA71 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shisa4Q8CA71 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shisa4Q8CA71 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shisa4Q8CA71 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Shisa4Q8CA71 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Shisa4Q8CA71 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shisa4Q8CA71 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Shisa4Q8CA71 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shisa4Q8CA71 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shisa4Q8CA71 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shisa4Q8CA71 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Shisa4Q8CA71 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Shisa4Q8CA71 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shisa4Q8CA71 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC15.38■□□□□ 0.05
Shisa4Q8CA71 Gm12363-201ENSMUST00000122250 668 ntBASIC15.38■□□□□ 0.05
Shisa4Q8CA71 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Shisa4Q8CA71 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms