Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm26110-201ENSMUST00000083971 165 ntBASIC12.01□□□□□ -0.49
Col6a6Q8C6K9 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Col6a6Q8C6K9 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Col6a6Q8C6K9 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.01□□□□□ -0.49
Col6a6Q8C6K9 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a6Q8C6K9 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.01□□□□□ -0.49
Col6a6Q8C6K9 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a6Q8C6K9 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.01□□□□□ -0.49
Col6a6Q8C6K9 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a6Q8C6K9 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Col6a6Q8C6K9 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12□□□□□ -0.49
Col6a6Q8C6K9 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12□□□□□ -0.49
Col6a6Q8C6K9 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a6Q8C6K9 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a6Q8C6K9 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Col6a6Q8C6K9 Gm2231-201ENSMUST00000125661 612 ntBASIC12□□□□□ -0.49
Col6a6Q8C6K9 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC12□□□□□ -0.49
Col6a6Q8C6K9 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a6Q8C6K9 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12□□□□□ -0.49
Col6a6Q8C6K9 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12□□□□□ -0.49
Col6a6Q8C6K9 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a6Q8C6K9 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Col6a6Q8C6K9 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a6Q8C6K9 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a6Q8C6K9 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12□□□□□ -0.49
Col6a6Q8C6K9 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12□□□□□ -0.49
Col6a6Q8C6K9 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a6Q8C6K9 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12□□□□□ -0.49
Col6a6Q8C6K9 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a6Q8C6K9 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a6Q8C6K9 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Col6a6Q8C6K9 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12□□□□□ -0.49
Col6a6Q8C6K9 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a6Q8C6K9 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a6Q8C6K9 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a6Q8C6K9 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Col6a6Q8C6K9 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a6Q8C6K9 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12□□□□□ -0.49
Col6a6Q8C6K9 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a6Q8C6K9 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a6Q8C6K9 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12□□□□□ -0.49
Col6a6Q8C6K9 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12□□□□□ -0.49
Col6a6Q8C6K9 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12□□□□□ -0.49
Col6a6Q8C6K9 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a6Q8C6K9 Gm14028-201ENSMUST00000117434 479 ntBASIC12□□□□□ -0.49
Col6a6Q8C6K9 Gm12363-201ENSMUST00000122250 668 ntBASIC12□□□□□ -0.49
Col6a6Q8C6K9 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC12□□□□□ -0.49
Col6a6Q8C6K9 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12□□□□□ -0.49
Col6a6Q8C6K9 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12□□□□□ -0.49
Col6a6Q8C6K9 B9d1os-201ENSMUST00000137010 674 ntBASIC12□□□□□ -0.49
Col6a6Q8C6K9 Gm7809-201ENSMUST00000153199 742 ntBASIC12□□□□□ -0.49
Col6a6Q8C6K9 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a6Q8C6K9 Gm18212-201ENSMUST00000211678 889 ntBASIC12□□□□□ -0.49
Col6a6Q8C6K9 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12□□□□□ -0.49
Col6a6Q8C6K9 Gm5950-201ENSMUST00000213337 772 ntBASIC12□□□□□ -0.49
Col6a6Q8C6K9 AC022775.2-201ENSMUST00000227885 646 ntBASIC12□□□□□ -0.49
Col6a6Q8C6K9 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a6Q8C6K9 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a6Q8C6K9 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a6Q8C6K9 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Col6a6Q8C6K9 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a6Q8C6K9 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12□□□□□ -0.49
Col6a6Q8C6K9 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12□□□□□ -0.49
Col6a6Q8C6K9 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a6Q8C6K9 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a6Q8C6K9 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12□□□□□ -0.49
Col6a6Q8C6K9 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a6Q8C6K9 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12□□□□□ -0.49
Col6a6Q8C6K9 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Col6a6Q8C6K9 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a6Q8C6K9 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a6Q8C6K9 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a6Q8C6K9 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Col6a6Q8C6K9 Gm16479-201ENSMUST00000121706 932 ntBASIC11.99□□□□□ -0.49
Col6a6Q8C6K9 Gm15276-201ENSMUST00000145953 498 ntBASIC11.99□□□□□ -0.49
Col6a6Q8C6K9 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.99□□□□□ -0.49
Col6a6Q8C6K9 Gm8885-201ENSMUST00000189382 598 ntBASIC11.99□□□□□ -0.49
Col6a6Q8C6K9 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.99□□□□□ -0.49
Col6a6Q8C6K9 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a6Q8C6K9 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.99□□□□□ -0.49
Col6a6Q8C6K9 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC11.99□□□□□ -0.49
Col6a6Q8C6K9 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.99□□□□□ -0.49
Col6a6Q8C6K9 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a6Q8C6K9 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a6Q8C6K9 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a6Q8C6K9 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Col6a6Q8C6K9 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Col6a6Q8C6K9 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a6Q8C6K9 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Col6a6Q8C6K9 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a6Q8C6K9 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a6Q8C6K9 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a6Q8C6K9 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a6Q8C6K9 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a6Q8C6K9 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a6Q8C6K9 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.99□□□□□ -0.49
Col6a6Q8C6K9 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a6Q8C6K9 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.99□□□□□ -0.49
Col6a6Q8C6K9 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.99□□□□□ -0.49
Col6a6Q8C6K9 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms