Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Usp44Q8C2S0 Gm8652-201ENSMUST00000181363 964 ntBASIC15.58■□□□□ 0.08
Usp44Q8C2S0 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Usp44Q8C2S0 Gm19931-201ENSMUST00000198920 368 ntBASIC15.58■□□□□ 0.08
Usp44Q8C2S0 Gm44985-201ENSMUST00000206202 1016 ntBASIC15.58■□□□□ 0.08
Usp44Q8C2S0 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC15.58■□□□□ 0.08
Usp44Q8C2S0 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Usp44Q8C2S0 Gm42928-201ENSMUST00000197338 3339 ntBASIC15.58■□□□□ 0.08
Usp44Q8C2S0 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
Usp44Q8C2S0 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Usp44Q8C2S0 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Usp44Q8C2S0 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Usp44Q8C2S0 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Usp44Q8C2S0 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Usp44Q8C2S0 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Usp44Q8C2S0 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Usp44Q8C2S0 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC15.58■□□□□ 0.08
Usp44Q8C2S0 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Usp44Q8C2S0 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC15.58■□□□□ 0.08
Usp44Q8C2S0 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Usp44Q8C2S0 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Usp44Q8C2S0 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Usp44Q8C2S0 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Usp44Q8C2S0 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Usp44Q8C2S0 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Usp44Q8C2S0 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Usp44Q8C2S0 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Usp44Q8C2S0 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Usp44Q8C2S0 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Usp44Q8C2S0 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Usp44Q8C2S0 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Usp44Q8C2S0 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Usp44Q8C2S0 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Usp44Q8C2S0 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Usp44Q8C2S0 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC15.57■□□□□ 0.08
Usp44Q8C2S0 Gm7063-201ENSMUST00000186840 981 ntBASIC15.57■□□□□ 0.08
Usp44Q8C2S0 Gm9124-201ENSMUST00000191789 1092 ntBASIC15.57■□□□□ 0.08
Usp44Q8C2S0 Gm9113-201ENSMUST00000192510 1018 ntBASIC15.57■□□□□ 0.08
Usp44Q8C2S0 Gm9131-201ENSMUST00000193557 1089 ntBASIC15.57■□□□□ 0.08
Usp44Q8C2S0 Gm9121-201ENSMUST00000193749 1071 ntBASIC15.57■□□□□ 0.08
Usp44Q8C2S0 Gm38094-201ENSMUST00000195864 2978 ntBASIC15.57■□□□□ 0.08
Usp44Q8C2S0 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Usp44Q8C2S0 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
Usp44Q8C2S0 Gm45706-201ENSMUST00000213063 2136 ntBASIC15.57■□□□□ 0.08
Usp44Q8C2S0 AC135669.1-202ENSMUST00000216742 540 ntBASIC15.57■□□□□ 0.08
Usp44Q8C2S0 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Usp44Q8C2S0 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Usp44Q8C2S0 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Usp44Q8C2S0 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Usp44Q8C2S0 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Usp44Q8C2S0 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC15.57■□□□□ 0.08
Usp44Q8C2S0 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Usp44Q8C2S0 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Usp44Q8C2S0 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Usp44Q8C2S0 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Usp44Q8C2S0 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Usp44Q8C2S0 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Usp44Q8C2S0 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC15.56■□□□□ 0.08
Usp44Q8C2S0 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC15.56■□□□□ 0.08
Usp44Q8C2S0 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Usp44Q8C2S0 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Usp44Q8C2S0 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Usp44Q8C2S0 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Usp44Q8C2S0 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Usp44Q8C2S0 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC15.56■□□□□ 0.08
Usp44Q8C2S0 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Usp44Q8C2S0 Gm8213-201ENSMUST00000118191 441 ntBASIC15.56■□□□□ 0.08
Usp44Q8C2S0 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Usp44Q8C2S0 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Usp44Q8C2S0 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Usp44Q8C2S0 Gm24196-201ENSMUST00000179161 110 ntBASIC15.56■□□□□ 0.08
Usp44Q8C2S0 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC15.56■□□□□ 0.08
Usp44Q8C2S0 Gm5356-201ENSMUST00000093326 615 ntBASIC15.56■□□□□ 0.08
Usp44Q8C2S0 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Usp44Q8C2S0 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Usp44Q8C2S0 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Usp44Q8C2S0 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Usp44Q8C2S0 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Usp44Q8C2S0 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Usp44Q8C2S0 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Usp44Q8C2S0 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Usp44Q8C2S0 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Usp44Q8C2S0 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Usp44Q8C2S0 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC15.55■□□□□ 0.08
Usp44Q8C2S0 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Usp44Q8C2S0 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Usp44Q8C2S0 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC15.55■□□□□ 0.08
Usp44Q8C2S0 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Usp44Q8C2S0 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Usp44Q8C2S0 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC15.55■□□□□ 0.08
Usp44Q8C2S0 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Usp44Q8C2S0 Gm16202-201ENSMUST00000117532 544 ntBASIC15.55■□□□□ 0.08
Usp44Q8C2S0 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC15.55■□□□□ 0.08
Usp44Q8C2S0 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC15.55■□□□□ 0.08
Usp44Q8C2S0 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Usp44Q8C2S0 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC15.55■□□□□ 0.08
Usp44Q8C2S0 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC15.55■□□□□ 0.08
Usp44Q8C2S0 Gm17794-201ENSMUST00000220252 955 ntBASIC15.55■□□□□ 0.08
Usp44Q8C2S0 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Usp44Q8C2S0 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms