Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trub1Q8C0D0 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trub1Q8C0D0 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trub1Q8C0D0 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trub1Q8C0D0 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trub1Q8C0D0 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trub1Q8C0D0 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trub1Q8C0D0 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trub1Q8C0D0 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trub1Q8C0D0 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trub1Q8C0D0 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trub1Q8C0D0 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trub1Q8C0D0 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trub1Q8C0D0 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.75□□□□□ -0.21
Trub1Q8C0D0 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trub1Q8C0D0 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trub1Q8C0D0 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trub1Q8C0D0 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trub1Q8C0D0 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trub1Q8C0D0 Gm15371-201ENSMUST00000117057 784 ntBASIC13.75□□□□□ -0.21
Trub1Q8C0D0 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trub1Q8C0D0 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trub1Q8C0D0 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.75□□□□□ -0.21
Trub1Q8C0D0 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.75□□□□□ -0.21
Trub1Q8C0D0 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.75□□□□□ -0.21
Trub1Q8C0D0 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trub1Q8C0D0 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trub1Q8C0D0 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trub1Q8C0D0 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trub1Q8C0D0 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trub1Q8C0D0 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trub1Q8C0D0 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trub1Q8C0D0 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
Trub1Q8C0D0 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trub1Q8C0D0 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trub1Q8C0D0 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Trub1Q8C0D0 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trub1Q8C0D0 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Trub1Q8C0D0 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trub1Q8C0D0 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Trub1Q8C0D0 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trub1Q8C0D0 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Trub1Q8C0D0 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trub1Q8C0D0 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trub1Q8C0D0 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trub1Q8C0D0 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trub1Q8C0D0 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trub1Q8C0D0 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trub1Q8C0D0 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trub1Q8C0D0 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.74□□□□□ -0.21
Trub1Q8C0D0 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trub1Q8C0D0 Gm6447-201ENSMUST00000118905 835 ntBASIC13.74□□□□□ -0.21
Trub1Q8C0D0 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trub1Q8C0D0 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.74□□□□□ -0.21
Trub1Q8C0D0 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trub1Q8C0D0 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Trub1Q8C0D0 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trub1Q8C0D0 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.74□□□□□ -0.21
Trub1Q8C0D0 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.74□□□□□ -0.21
Trub1Q8C0D0 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trub1Q8C0D0 Gm6983-201ENSMUST00000214912 628 ntBASIC13.74□□□□□ -0.21
Trub1Q8C0D0 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trub1Q8C0D0 Gm15823-201ENSMUST00000064305 670 ntBASIC13.74□□□□□ -0.21
Trub1Q8C0D0 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Trub1Q8C0D0 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.74□□□□□ -0.21
Trub1Q8C0D0 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.74□□□□□ -0.21
Trub1Q8C0D0 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trub1Q8C0D0 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trub1Q8C0D0 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trub1Q8C0D0 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trub1Q8C0D0 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trub1Q8C0D0 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trub1Q8C0D0 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trub1Q8C0D0 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trub1Q8C0D0 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trub1Q8C0D0 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trub1Q8C0D0 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trub1Q8C0D0 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trub1Q8C0D0 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trub1Q8C0D0 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trub1Q8C0D0 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trub1Q8C0D0 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trub1Q8C0D0 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trub1Q8C0D0 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.73□□□□□ -0.21
Trub1Q8C0D0 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trub1Q8C0D0 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trub1Q8C0D0 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trub1Q8C0D0 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trub1Q8C0D0 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trub1Q8C0D0 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trub1Q8C0D0 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trub1Q8C0D0 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trub1Q8C0D0 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trub1Q8C0D0 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trub1Q8C0D0 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Trub1Q8C0D0 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trub1Q8C0D0 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.73□□□□□ -0.21
Trub1Q8C0D0 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trub1Q8C0D0 Gm44397-201ENSMUST00000195950 113 ntBASIC13.73□□□□□ -0.21
Trub1Q8C0D0 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms