Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sh3rf2Q8BZT2 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sh3rf2Q8BZT2 Gm2231-201ENSMUST00000125661 612 ntBASIC13.49□□□□□ -0.25
Sh3rf2Q8BZT2 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC13.49□□□□□ -0.25
Sh3rf2Q8BZT2 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC13.49□□□□□ -0.25
Sh3rf2Q8BZT2 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sh3rf2Q8BZT2 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sh3rf2Q8BZT2 Gm17823-201ENSMUST00000217830 1006 ntBASIC13.49□□□□□ -0.25
Sh3rf2Q8BZT2 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sh3rf2Q8BZT2 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sh3rf2Q8BZT2 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sh3rf2Q8BZT2 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sh3rf2Q8BZT2 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sh3rf2Q8BZT2 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sh3rf2Q8BZT2 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sh3rf2Q8BZT2 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sh3rf2Q8BZT2 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Sh3rf2Q8BZT2 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.49□□□□□ -0.25
Sh3rf2Q8BZT2 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sh3rf2Q8BZT2 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Sh3rf2Q8BZT2 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Sh3rf2Q8BZT2 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sh3rf2Q8BZT2 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sh3rf2Q8BZT2 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Sh3rf2Q8BZT2 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sh3rf2Q8BZT2 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Sh3rf2Q8BZT2 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sh3rf2Q8BZT2 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sh3rf2Q8BZT2 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sh3rf2Q8BZT2 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sh3rf2Q8BZT2 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sh3rf2Q8BZT2 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sh3rf2Q8BZT2 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Sh3rf2Q8BZT2 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sh3rf2Q8BZT2 Mir1247-201ENSMUST00000116706 82 ntBASIC13.48□□□□□ -0.25
Sh3rf2Q8BZT2 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC13.48□□□□□ -0.25
Sh3rf2Q8BZT2 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.48□□□□□ -0.25
Sh3rf2Q8BZT2 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC13.48□□□□□ -0.25
Sh3rf2Q8BZT2 Gm43179-201ENSMUST00000198797 275 ntBASIC13.48□□□□□ -0.25
Sh3rf2Q8BZT2 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sh3rf2Q8BZT2 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Sh3rf2Q8BZT2 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sh3rf2Q8BZT2 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sh3rf2Q8BZT2 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.48□□□□□ -0.25
Sh3rf2Q8BZT2 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sh3rf2Q8BZT2 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sh3rf2Q8BZT2 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sh3rf2Q8BZT2 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sh3rf2Q8BZT2 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.48□□□□□ -0.25
Sh3rf2Q8BZT2 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Sh3rf2Q8BZT2 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sh3rf2Q8BZT2 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sh3rf2Q8BZT2 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sh3rf2Q8BZT2 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sh3rf2Q8BZT2 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sh3rf2Q8BZT2 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sh3rf2Q8BZT2 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Sh3rf2Q8BZT2 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.47□□□□□ -0.25
Sh3rf2Q8BZT2 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sh3rf2Q8BZT2 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.47□□□□□ -0.25
Sh3rf2Q8BZT2 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sh3rf2Q8BZT2 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sh3rf2Q8BZT2 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sh3rf2Q8BZT2 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sh3rf2Q8BZT2 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sh3rf2Q8BZT2 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sh3rf2Q8BZT2 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sh3rf2Q8BZT2 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sh3rf2Q8BZT2 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sh3rf2Q8BZT2 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Sh3rf2Q8BZT2 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sh3rf2Q8BZT2 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC13.47□□□□□ -0.25
Sh3rf2Q8BZT2 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC13.47□□□□□ -0.25
Sh3rf2Q8BZT2 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.47□□□□□ -0.25
Sh3rf2Q8BZT2 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sh3rf2Q8BZT2 Gm8801-201ENSMUST00000173255 1064 ntBASIC13.47□□□□□ -0.25
Sh3rf2Q8BZT2 Gm25927-201ENSMUST00000175058 117 ntBASIC13.47□□□□□ -0.25
Sh3rf2Q8BZT2 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sh3rf2Q8BZT2 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.47□□□□□ -0.25
Sh3rf2Q8BZT2 AC133598.1-201ENSMUST00000224327 660 ntBASIC13.47□□□□□ -0.25
Sh3rf2Q8BZT2 AC140406.1-201ENSMUST00000226481 465 ntBASIC13.47□□□□□ -0.25
Sh3rf2Q8BZT2 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sh3rf2Q8BZT2 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.47□□□□□ -0.25
Sh3rf2Q8BZT2 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sh3rf2Q8BZT2 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sh3rf2Q8BZT2 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sh3rf2Q8BZT2 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sh3rf2Q8BZT2 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sh3rf2Q8BZT2 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Sh3rf2Q8BZT2 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sh3rf2Q8BZT2 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Sh3rf2Q8BZT2 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sh3rf2Q8BZT2 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sh3rf2Q8BZT2 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sh3rf2Q8BZT2 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.46□□□□□ -0.25
Sh3rf2Q8BZT2 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sh3rf2Q8BZT2 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sh3rf2Q8BZT2 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sh3rf2Q8BZT2 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sh3rf2Q8BZT2 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms