Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ube3dQ8BX13 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Ube3dQ8BX13 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ube3dQ8BX13 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
Ube3dQ8BX13 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ube3dQ8BX13 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Ube3dQ8BX13 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Ube3dQ8BX13 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Ube3dQ8BX13 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC11.87□□□□□ -0.51
Ube3dQ8BX13 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ube3dQ8BX13 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Ube3dQ8BX13 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ube3dQ8BX13 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC11.87□□□□□ -0.51
Ube3dQ8BX13 Gm12341-201ENSMUST00000119724 503 ntBASIC11.87□□□□□ -0.51
Ube3dQ8BX13 Gm11918-201ENSMUST00000121660 179 ntBASIC11.87□□□□□ -0.51
Ube3dQ8BX13 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ube3dQ8BX13 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ube3dQ8BX13 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC11.87□□□□□ -0.51
Ube3dQ8BX13 Gm18905-201ENSMUST00000205454 928 ntBASIC11.87□□□□□ -0.51
Ube3dQ8BX13 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ube3dQ8BX13 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Ube3dQ8BX13 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ube3dQ8BX13 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ube3dQ8BX13 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ube3dQ8BX13 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ube3dQ8BX13 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ube3dQ8BX13 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ube3dQ8BX13 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Ube3dQ8BX13 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ube3dQ8BX13 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ube3dQ8BX13 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ube3dQ8BX13 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ube3dQ8BX13 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ube3dQ8BX13 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ube3dQ8BX13 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ube3dQ8BX13 Gm15163-201ENSMUST00000120749 1302 ntBASIC11.86□□□□□ -0.51
Ube3dQ8BX13 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ube3dQ8BX13 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ube3dQ8BX13 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Ube3dQ8BX13 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ube3dQ8BX13 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ube3dQ8BX13 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.86□□□□□ -0.51
Ube3dQ8BX13 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Ube3dQ8BX13 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ube3dQ8BX13 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ube3dQ8BX13 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ube3dQ8BX13 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ube3dQ8BX13 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Ube3dQ8BX13 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ube3dQ8BX13 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC11.86□□□□□ -0.51
Ube3dQ8BX13 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC11.86□□□□□ -0.51
Ube3dQ8BX13 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ube3dQ8BX13 Gm15240-201ENSMUST00000118156 720 ntBASIC11.86□□□□□ -0.51
Ube3dQ8BX13 Gm13385-201ENSMUST00000121089 220 ntBASIC11.86□□□□□ -0.51
Ube3dQ8BX13 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC11.86□□□□□ -0.51
Ube3dQ8BX13 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC11.86□□□□□ -0.51
Ube3dQ8BX13 Gm36991-201ENSMUST00000191800 648 ntBASIC11.86□□□□□ -0.51
Ube3dQ8BX13 Ighv1-51-201ENSMUST00000192903 354 ntBASIC11.86□□□□□ -0.51
Ube3dQ8BX13 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC11.86□□□□□ -0.51
Ube3dQ8BX13 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ube3dQ8BX13 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ube3dQ8BX13 AC238811.3-201ENSMUST00000225422 709 ntBASIC11.86□□□□□ -0.51
Ube3dQ8BX13 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ube3dQ8BX13 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ube3dQ8BX13 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Ube3dQ8BX13 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC11.86□□□□□ -0.51
Ube3dQ8BX13 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ube3dQ8BX13 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Ube3dQ8BX13 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ube3dQ8BX13 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ube3dQ8BX13 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ube3dQ8BX13 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.86□□□□□ -0.51
Ube3dQ8BX13 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ube3dQ8BX13 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ube3dQ8BX13 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ube3dQ8BX13 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Ube3dQ8BX13 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.86□□□□□ -0.51
Ube3dQ8BX13 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ube3dQ8BX13 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Ube3dQ8BX13 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ube3dQ8BX13 Gm44891-201ENSMUST00000208817 2223 ntBASIC11.86□□□□□ -0.51
Ube3dQ8BX13 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ube3dQ8BX13 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ube3dQ8BX13 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Ube3dQ8BX13 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ube3dQ8BX13 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Ube3dQ8BX13 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ube3dQ8BX13 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Ube3dQ8BX13 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ube3dQ8BX13 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Ube3dQ8BX13 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ube3dQ8BX13 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ube3dQ8BX13 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ube3dQ8BX13 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ube3dQ8BX13 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Ube3dQ8BX13 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ube3dQ8BX13 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ube3dQ8BX13 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ube3dQ8BX13 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ube3dQ8BX13 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms