Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Gm27772-201ENSMUST00000184900 187 ntBASIC11.65□□□□□ -0.54
Cdhr3Q8BL00 Gm27321-201ENSMUST00000185021 205 ntBASIC11.65□□□□□ -0.54
Cdhr3Q8BL00 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdhr3Q8BL00 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC11.65□□□□□ -0.54
Cdhr3Q8BL00 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdhr3Q8BL00 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Cdhr3Q8BL00 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdhr3Q8BL00 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Cdhr3Q8BL00 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Cdhr3Q8BL00 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdhr3Q8BL00 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cdhr3Q8BL00 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdhr3Q8BL00 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdhr3Q8BL00 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdhr3Q8BL00 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Cdhr3Q8BL00 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdhr3Q8BL00 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.65□□□□□ -0.54
Cdhr3Q8BL00 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdhr3Q8BL00 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdhr3Q8BL00 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdhr3Q8BL00 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Cdhr3Q8BL00 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdhr3Q8BL00 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdhr3Q8BL00 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Cdhr3Q8BL00 Gm37015-201ENSMUST00000192763 1521 ntBASIC11.65□□□□□ -0.55
Cdhr3Q8BL00 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Cdhr3Q8BL00 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Cdhr3Q8BL00 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
Cdhr3Q8BL00 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
Cdhr3Q8BL00 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC11.65□□□□□ -0.55
Cdhr3Q8BL00 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Cdhr3Q8BL00 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdhr3Q8BL00 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdhr3Q8BL00 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.64□□□□□ -0.55
Cdhr3Q8BL00 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdhr3Q8BL00 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdhr3Q8BL00 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdhr3Q8BL00 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Cdhr3Q8BL00 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cdhr3Q8BL00 Gm45643-201ENSMUST00000211364 1484 ntBASIC11.64□□□□□ -0.55
Cdhr3Q8BL00 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Cdhr3Q8BL00 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdhr3Q8BL00 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdhr3Q8BL00 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdhr3Q8BL00 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
Cdhr3Q8BL00 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdhr3Q8BL00 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Cdhr3Q8BL00 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdhr3Q8BL00 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cdhr3Q8BL00 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdhr3Q8BL00 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdhr3Q8BL00 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Cdhr3Q8BL00 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdhr3Q8BL00 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cdhr3Q8BL00 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Cdhr3Q8BL00 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdhr3Q8BL00 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdhr3Q8BL00 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC11.64□□□□□ -0.55
Cdhr3Q8BL00 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cdhr3Q8BL00 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdhr3Q8BL00 Gm25948-201ENSMUST00000175334 112 ntBASIC11.64□□□□□ -0.55
Cdhr3Q8BL00 Gm2756-201ENSMUST00000195851 400 ntBASIC11.64□□□□□ -0.55
Cdhr3Q8BL00 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Cdhr3Q8BL00 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC11.64□□□□□ -0.55
Cdhr3Q8BL00 Gm6888-201ENSMUST00000221983 706 ntBASIC11.64□□□□□ -0.55
Cdhr3Q8BL00 AC154846.1-201ENSMUST00000226278 862 ntBASIC11.64□□□□□ -0.55
Cdhr3Q8BL00 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdhr3Q8BL00 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdhr3Q8BL00 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cdhr3Q8BL00 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdhr3Q8BL00 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdhr3Q8BL00 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdhr3Q8BL00 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdhr3Q8BL00 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdhr3Q8BL00 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdhr3Q8BL00 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC11.64□□□□□ -0.55
Cdhr3Q8BL00 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC11.64□□□□□ -0.55
Cdhr3Q8BL00 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdhr3Q8BL00 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Cdhr3Q8BL00 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Cdhr3Q8BL00 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdhr3Q8BL00 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdhr3Q8BL00 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Cdhr3Q8BL00 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.64□□□□□ -0.55
Cdhr3Q8BL00 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdhr3Q8BL00 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cdhr3Q8BL00 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.64□□□□□ -0.55
Cdhr3Q8BL00 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Cdhr3Q8BL00 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdhr3Q8BL00 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Cdhr3Q8BL00 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdhr3Q8BL00 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cdhr3Q8BL00 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdhr3Q8BL00 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdhr3Q8BL00 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Cdhr3Q8BL00 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cdhr3Q8BL00 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Cdhr3Q8BL00 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cdhr3Q8BL00 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Cdhr3Q8BL00 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms