Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc40Q8BI79 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Ccdc40Q8BI79 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc40Q8BI79 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc40Q8BI79 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc40Q8BI79 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc40Q8BI79 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Ccdc40Q8BI79 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc40Q8BI79 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc40Q8BI79 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc40Q8BI79 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc40Q8BI79 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.96□□□□□ -0.17
Ccdc40Q8BI79 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc40Q8BI79 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Ccdc40Q8BI79 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Ccdc40Q8BI79 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc40Q8BI79 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Ccdc40Q8BI79 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Ccdc40Q8BI79 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13.96□□□□□ -0.17
Ccdc40Q8BI79 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc40Q8BI79 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.96□□□□□ -0.17
Ccdc40Q8BI79 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc40Q8BI79 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.96□□□□□ -0.17
Ccdc40Q8BI79 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC13.96□□□□□ -0.17
Ccdc40Q8BI79 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.96□□□□□ -0.17
Ccdc40Q8BI79 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc40Q8BI79 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc40Q8BI79 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc40Q8BI79 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc40Q8BI79 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.96□□□□□ -0.17
Ccdc40Q8BI79 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc40Q8BI79 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Ccdc40Q8BI79 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc40Q8BI79 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc40Q8BI79 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Ccdc40Q8BI79 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.96□□□□□ -0.18
Ccdc40Q8BI79 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc40Q8BI79 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc40Q8BI79 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Ccdc40Q8BI79 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc40Q8BI79 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc40Q8BI79 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc40Q8BI79 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc40Q8BI79 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc40Q8BI79 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc40Q8BI79 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc40Q8BI79 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc40Q8BI79 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc40Q8BI79 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.95□□□□□ -0.18
Ccdc40Q8BI79 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc40Q8BI79 Gm27838-201ENSMUST00000184829 128 ntBASIC13.95□□□□□ -0.18
Ccdc40Q8BI79 Mir7023-201ENSMUST00000185093 64 ntBASIC13.95□□□□□ -0.18
Ccdc40Q8BI79 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc40Q8BI79 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc40Q8BI79 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc40Q8BI79 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc40Q8BI79 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc40Q8BI79 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Ccdc40Q8BI79 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Ccdc40Q8BI79 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc40Q8BI79 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc40Q8BI79 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.95□□□□□ -0.18
Ccdc40Q8BI79 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.95□□□□□ -0.18
Ccdc40Q8BI79 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc40Q8BI79 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc40Q8BI79 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.95□□□□□ -0.18
Ccdc40Q8BI79 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc40Q8BI79 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc40Q8BI79 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc40Q8BI79 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Ccdc40Q8BI79 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Ccdc40Q8BI79 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc40Q8BI79 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.94□□□□□ -0.18
Ccdc40Q8BI79 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc40Q8BI79 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Ccdc40Q8BI79 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Ccdc40Q8BI79 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc40Q8BI79 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc40Q8BI79 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc40Q8BI79 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Ccdc40Q8BI79 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc40Q8BI79 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc40Q8BI79 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.94□□□□□ -0.18
Ccdc40Q8BI79 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.94□□□□□ -0.18
Ccdc40Q8BI79 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc40Q8BI79 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Ccdc40Q8BI79 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc40Q8BI79 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc40Q8BI79 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.94□□□□□ -0.18
Ccdc40Q8BI79 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc40Q8BI79 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.94□□□□□ -0.18
Ccdc40Q8BI79 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc40Q8BI79 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc40Q8BI79 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc40Q8BI79 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.94□□□□□ -0.18
Ccdc40Q8BI79 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.94□□□□□ -0.18
Ccdc40Q8BI79 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc40Q8BI79 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc40Q8BI79 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc40Q8BI79 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms