Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clrn3Q8BHH8 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.56□□□□□ -0.4
Clrn3Q8BHH8 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.56□□□□□ -0.4
Clrn3Q8BHH8 Gm16215-201ENSMUST00000161990 637 ntBASIC12.56□□□□□ -0.4
Clrn3Q8BHH8 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Clrn3Q8BHH8 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Clrn3Q8BHH8 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.56□□□□□ -0.4
Clrn3Q8BHH8 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Clrn3Q8BHH8 AC125206.2-201ENSMUST00000217454 574 ntBASIC12.56□□□□□ -0.4
Clrn3Q8BHH8 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clrn3Q8BHH8 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Clrn3Q8BHH8 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.56□□□□□ -0.4
Clrn3Q8BHH8 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.56□□□□□ -0.4
Clrn3Q8BHH8 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clrn3Q8BHH8 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clrn3Q8BHH8 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Clrn3Q8BHH8 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clrn3Q8BHH8 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clrn3Q8BHH8 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clrn3Q8BHH8 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clrn3Q8BHH8 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Clrn3Q8BHH8 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clrn3Q8BHH8 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Clrn3Q8BHH8 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clrn3Q8BHH8 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Clrn3Q8BHH8 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Clrn3Q8BHH8 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.55□□□□□ -0.4
Clrn3Q8BHH8 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clrn3Q8BHH8 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clrn3Q8BHH8 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clrn3Q8BHH8 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clrn3Q8BHH8 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.55□□□□□ -0.4
Clrn3Q8BHH8 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.55□□□□□ -0.4
Clrn3Q8BHH8 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.55□□□□□ -0.4
Clrn3Q8BHH8 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Clrn3Q8BHH8 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Clrn3Q8BHH8 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Clrn3Q8BHH8 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Clrn3Q8BHH8 Gm27437-201ENSMUST00000183429 107 ntBASIC12.55□□□□□ -0.4
Clrn3Q8BHH8 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Clrn3Q8BHH8 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Clrn3Q8BHH8 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.55□□□□□ -0.4
Clrn3Q8BHH8 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.55□□□□□ -0.4
Clrn3Q8BHH8 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.55□□□□□ -0.4
Clrn3Q8BHH8 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clrn3Q8BHH8 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Clrn3Q8BHH8 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clrn3Q8BHH8 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clrn3Q8BHH8 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Clrn3Q8BHH8 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clrn3Q8BHH8 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Clrn3Q8BHH8 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clrn3Q8BHH8 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.55□□□□□ -0.4
Clrn3Q8BHH8 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clrn3Q8BHH8 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clrn3Q8BHH8 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clrn3Q8BHH8 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Clrn3Q8BHH8 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.55□□□□□ -0.4
Clrn3Q8BHH8 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clrn3Q8BHH8 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clrn3Q8BHH8 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.55□□□□□ -0.4
Clrn3Q8BHH8 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clrn3Q8BHH8 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clrn3Q8BHH8 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clrn3Q8BHH8 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clrn3Q8BHH8 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Clrn3Q8BHH8 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Clrn3Q8BHH8 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clrn3Q8BHH8 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Clrn3Q8BHH8 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Clrn3Q8BHH8 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Clrn3Q8BHH8 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Clrn3Q8BHH8 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.54□□□□□ -0.4
Clrn3Q8BHH8 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clrn3Q8BHH8 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Clrn3Q8BHH8 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.54□□□□□ -0.4
Clrn3Q8BHH8 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clrn3Q8BHH8 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clrn3Q8BHH8 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clrn3Q8BHH8 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.54□□□□□ -0.4
Clrn3Q8BHH8 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Clrn3Q8BHH8 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Clrn3Q8BHH8 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Clrn3Q8BHH8 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Clrn3Q8BHH8 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Clrn3Q8BHH8 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clrn3Q8BHH8 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clrn3Q8BHH8 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clrn3Q8BHH8 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clrn3Q8BHH8 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Clrn3Q8BHH8 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clrn3Q8BHH8 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.54□□□□□ -0.4
Clrn3Q8BHH8 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.54□□□□□ -0.4
Clrn3Q8BHH8 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clrn3Q8BHH8 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clrn3Q8BHH8 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clrn3Q8BHH8 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clrn3Q8BHH8 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clrn3Q8BHH8 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Clrn3Q8BHH8 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms