Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Atg4bQ8BGE6 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atg4bQ8BGE6 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.57□□□□□ -0.4
Atg4bQ8BGE6 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atg4bQ8BGE6 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atg4bQ8BGE6 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atg4bQ8BGE6 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atg4bQ8BGE6 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Atg4bQ8BGE6 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.57□□□□□ -0.4
Atg4bQ8BGE6 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Atg4bQ8BGE6 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atg4bQ8BGE6 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atg4bQ8BGE6 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atg4bQ8BGE6 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atg4bQ8BGE6 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.57□□□□□ -0.4
Atg4bQ8BGE6 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atg4bQ8BGE6 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atg4bQ8BGE6 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atg4bQ8BGE6 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atg4bQ8BGE6 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Atg4bQ8BGE6 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.56□□□□□ -0.4
Atg4bQ8BGE6 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atg4bQ8BGE6 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atg4bQ8BGE6 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atg4bQ8BGE6 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Atg4bQ8BGE6 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atg4bQ8BGE6 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Atg4bQ8BGE6 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Atg4bQ8BGE6 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atg4bQ8BGE6 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Atg4bQ8BGE6 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atg4bQ8BGE6 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atg4bQ8BGE6 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atg4bQ8BGE6 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atg4bQ8BGE6 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atg4bQ8BGE6 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atg4bQ8BGE6 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.56□□□□□ -0.4
Atg4bQ8BGE6 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.56□□□□□ -0.4
Atg4bQ8BGE6 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Atg4bQ8BGE6 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atg4bQ8BGE6 Gm8515-201ENSMUST00000194852 576 ntBASIC12.56□□□□□ -0.4
Atg4bQ8BGE6 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Atg4bQ8BGE6 Gm9908-201ENSMUST00000211534 448 ntBASIC12.56□□□□□ -0.4
Atg4bQ8BGE6 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.56□□□□□ -0.4
Atg4bQ8BGE6 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.56□□□□□ -0.4
Atg4bQ8BGE6 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.56□□□□□ -0.4
Atg4bQ8BGE6 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Atg4bQ8BGE6 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atg4bQ8BGE6 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Atg4bQ8BGE6 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Atg4bQ8BGE6 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atg4bQ8BGE6 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atg4bQ8BGE6 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atg4bQ8BGE6 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atg4bQ8BGE6 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Atg4bQ8BGE6 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.56□□□□□ -0.4
Atg4bQ8BGE6 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.56□□□□□ -0.4
Atg4bQ8BGE6 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Atg4bQ8BGE6 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Atg4bQ8BGE6 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.56□□□□□ -0.4
Atg4bQ8BGE6 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.56□□□□□ -0.4
Atg4bQ8BGE6 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Atg4bQ8BGE6 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atg4bQ8BGE6 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.56□□□□□ -0.4
Atg4bQ8BGE6 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atg4bQ8BGE6 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Atg4bQ8BGE6 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Atg4bQ8BGE6 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Atg4bQ8BGE6 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Atg4bQ8BGE6 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Atg4bQ8BGE6 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Atg4bQ8BGE6 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Atg4bQ8BGE6 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Atg4bQ8BGE6 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Atg4bQ8BGE6 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Atg4bQ8BGE6 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Atg4bQ8BGE6 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Atg4bQ8BGE6 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.55□□□□□ -0.4
Atg4bQ8BGE6 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Atg4bQ8BGE6 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.55□□□□□ -0.4
Atg4bQ8BGE6 Gm27701-201ENSMUST00000184498 110 ntBASIC12.55□□□□□ -0.4
Atg4bQ8BGE6 Gm2495-201ENSMUST00000191160 466 ntBASIC12.55□□□□□ -0.4
Atg4bQ8BGE6 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Atg4bQ8BGE6 Gm6745-201ENSMUST00000199216 526 ntBASIC12.55□□□□□ -0.4
Atg4bQ8BGE6 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.55□□□□□ -0.4
Atg4bQ8BGE6 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Atg4bQ8BGE6 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Atg4bQ8BGE6 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Atg4bQ8BGE6 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Atg4bQ8BGE6 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Atg4bQ8BGE6 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Atg4bQ8BGE6 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.55□□□□□ -0.4
Atg4bQ8BGE6 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Atg4bQ8BGE6 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Atg4bQ8BGE6 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Atg4bQ8BGE6 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Atg4bQ8BGE6 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Atg4bQ8BGE6 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.55□□□□□ -0.4
Atg4bQ8BGE6 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Atg4bQ8BGE6 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms