Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC13.17□□□□□ -0.3
Ubp1Q811S7 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC13.17□□□□□ -0.3
Ubp1Q811S7 Gm7653-201ENSMUST00000214567 508 ntBASIC13.17□□□□□ -0.3
Ubp1Q811S7 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.17□□□□□ -0.3
Ubp1Q811S7 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ubp1Q811S7 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ubp1Q811S7 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Ubp1Q811S7 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Ubp1Q811S7 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Ubp1Q811S7 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ubp1Q811S7 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ubp1Q811S7 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ubp1Q811S7 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ubp1Q811S7 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ubp1Q811S7 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ubp1Q811S7 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Ubp1Q811S7 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ubp1Q811S7 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ubp1Q811S7 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ubp1Q811S7 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Ubp1Q811S7 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ubp1Q811S7 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Ubp1Q811S7 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ubp1Q811S7 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ubp1Q811S7 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ubp1Q811S7 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubp1Q811S7 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.16□□□□□ -0.3
Ubp1Q811S7 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubp1Q811S7 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubp1Q811S7 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubp1Q811S7 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubp1Q811S7 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ubp1Q811S7 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ubp1Q811S7 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ubp1Q811S7 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ubp1Q811S7 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ubp1Q811S7 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
Ubp1Q811S7 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ubp1Q811S7 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubp1Q811S7 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubp1Q811S7 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubp1Q811S7 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubp1Q811S7 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Ubp1Q811S7 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Ubp1Q811S7 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.16□□□□□ -0.3
Ubp1Q811S7 Gm27701-201ENSMUST00000184498 110 ntBASIC13.16□□□□□ -0.3
Ubp1Q811S7 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.16□□□□□ -0.3
Ubp1Q811S7 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.16□□□□□ -0.3
Ubp1Q811S7 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubp1Q811S7 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Ubp1Q811S7 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Ubp1Q811S7 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubp1Q811S7 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ubp1Q811S7 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubp1Q811S7 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubp1Q811S7 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.16□□□□□ -0.3
Ubp1Q811S7 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubp1Q811S7 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ubp1Q811S7 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.16□□□□□ -0.3
Ubp1Q811S7 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.16□□□□□ -0.3
Ubp1Q811S7 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubp1Q811S7 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubp1Q811S7 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubp1Q811S7 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubp1Q811S7 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ubp1Q811S7 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Ubp1Q811S7 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ubp1Q811S7 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.15□□□□□ -0.3
Ubp1Q811S7 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ubp1Q811S7 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ubp1Q811S7 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ubp1Q811S7 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ubp1Q811S7 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ubp1Q811S7 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Ubp1Q811S7 Gm15371-201ENSMUST00000117057 784 ntBASIC13.15□□□□□ -0.3
Ubp1Q811S7 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.15□□□□□ -0.3
Ubp1Q811S7 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ubp1Q811S7 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ubp1Q811S7 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ubp1Q811S7 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ubp1Q811S7 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ubp1Q811S7 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.15□□□□□ -0.3
Ubp1Q811S7 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ubp1Q811S7 Gm38144-201ENSMUST00000192790 465 ntBASIC13.15□□□□□ -0.3
Ubp1Q811S7 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.15□□□□□ -0.3
Ubp1Q811S7 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.15□□□□□ -0.3
Ubp1Q811S7 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.15□□□□□ -0.3
Ubp1Q811S7 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ubp1Q811S7 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ubp1Q811S7 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ubp1Q811S7 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ubp1Q811S7 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ubp1Q811S7 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ubp1Q811S7 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ubp1Q811S7 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ubp1Q811S7 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ubp1Q811S7 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.15□□□□□ -0.3
Ubp1Q811S7 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ubp1Q811S7 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ubp1Q811S7 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms