Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim62Q80V85 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim62Q80V85 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Trim62Q80V85 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.78□□□□□ -0.2
Trim62Q80V85 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim62Q80V85 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.78□□□□□ -0.2
Trim62Q80V85 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim62Q80V85 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim62Q80V85 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim62Q80V85 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim62Q80V85 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Trim62Q80V85 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim62Q80V85 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim62Q80V85 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim62Q80V85 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trim62Q80V85 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trim62Q80V85 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trim62Q80V85 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.77□□□□□ -0.2
Trim62Q80V85 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trim62Q80V85 Gm13050-201ENSMUST00000122149 1345 ntBASIC13.77□□□□□ -0.21
Trim62Q80V85 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim62Q80V85 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.77□□□□□ -0.21
Trim62Q80V85 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim62Q80V85 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim62Q80V85 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim62Q80V85 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim62Q80V85 Gm19931-201ENSMUST00000198920 368 ntBASIC13.77□□□□□ -0.21
Trim62Q80V85 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim62Q80V85 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.77□□□□□ -0.21
Trim62Q80V85 Gm7067-201ENSMUST00000207698 1249 ntBASIC13.77□□□□□ -0.21
Trim62Q80V85 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.77□□□□□ -0.21
Trim62Q80V85 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.77□□□□□ -0.21
Trim62Q80V85 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Trim62Q80V85 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim62Q80V85 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim62Q80V85 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Trim62Q80V85 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim62Q80V85 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim62Q80V85 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim62Q80V85 Gm10012-201ENSMUST00000078252 192 ntBASIC13.77□□□□□ -0.21
Trim62Q80V85 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim62Q80V85 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
Trim62Q80V85 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim62Q80V85 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim62Q80V85 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim62Q80V85 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Trim62Q80V85 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Trim62Q80V85 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.76□□□□□ -0.21
Trim62Q80V85 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim62Q80V85 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim62Q80V85 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.76□□□□□ -0.21
Trim62Q80V85 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim62Q80V85 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim62Q80V85 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trim62Q80V85 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.76□□□□□ -0.21
Trim62Q80V85 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.76□□□□□ -0.21
Trim62Q80V85 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim62Q80V85 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim62Q80V85 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim62Q80V85 Gm14350-201ENSMUST00000116642 640 ntBASIC13.76□□□□□ -0.21
Trim62Q80V85 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim62Q80V85 Gm11618-201ENSMUST00000117946 267 ntBASIC13.76□□□□□ -0.21
Trim62Q80V85 Gm27847-201ENSMUST00000183711 107 ntBASIC13.76□□□□□ -0.21
Trim62Q80V85 Gm27375-201ENSMUST00000183799 107 ntBASIC13.76□□□□□ -0.21
Trim62Q80V85 Gm8598-201ENSMUST00000221184 836 ntBASIC13.76□□□□□ -0.21
Trim62Q80V85 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
Trim62Q80V85 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim62Q80V85 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim62Q80V85 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim62Q80V85 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim62Q80V85 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim62Q80V85 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim62Q80V85 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim62Q80V85 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.76□□□□□ -0.21
Trim62Q80V85 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim62Q80V85 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Trim62Q80V85 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim62Q80V85 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim62Q80V85 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim62Q80V85 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim62Q80V85 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim62Q80V85 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim62Q80V85 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Trim62Q80V85 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim62Q80V85 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim62Q80V85 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim62Q80V85 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim62Q80V85 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim62Q80V85 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim62Q80V85 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim62Q80V85 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim62Q80V85 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.75□□□□□ -0.21
Trim62Q80V85 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim62Q80V85 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim62Q80V85 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.75□□□□□ -0.21
Trim62Q80V85 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.75□□□□□ -0.21
Trim62Q80V85 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim62Q80V85 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.75□□□□□ -0.21
Trim62Q80V85 Proscos-202ENSMUST00000178990 666 ntBASIC13.75□□□□□ -0.21
Trim62Q80V85 Gm18187-201ENSMUST00000196476 984 ntBASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms