Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Gm37008-201ENSMUST00000195712 319 ntBASIC12.34□□□□□ -0.43
Pif1Q80SX8 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.34□□□□□ -0.43
Pif1Q80SX8 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.34□□□□□ -0.43
Pif1Q80SX8 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pif1Q80SX8 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.34□□□□□ -0.43
Pif1Q80SX8 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Pif1Q80SX8 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Pif1Q80SX8 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pif1Q80SX8 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pif1Q80SX8 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pif1Q80SX8 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pif1Q80SX8 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.34□□□□□ -0.43
Pif1Q80SX8 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pif1Q80SX8 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pif1Q80SX8 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.34□□□□□ -0.43
Pif1Q80SX8 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.34□□□□□ -0.43
Pif1Q80SX8 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pif1Q80SX8 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pif1Q80SX8 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.34□□□□□ -0.43
Pif1Q80SX8 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Pif1Q80SX8 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pif1Q80SX8 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Pif1Q80SX8 Gm43014-201ENSMUST00000198568 2443 ntBASIC12.33□□□□□ -0.43
Pif1Q80SX8 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Pif1Q80SX8 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
Pif1Q80SX8 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Pif1Q80SX8 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pif1Q80SX8 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.33□□□□□ -0.44
Pif1Q80SX8 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.33□□□□□ -0.44
Pif1Q80SX8 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.33□□□□□ -0.44
Pif1Q80SX8 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pif1Q80SX8 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Pif1Q80SX8 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pif1Q80SX8 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Pif1Q80SX8 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Pif1Q80SX8 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.33□□□□□ -0.44
Pif1Q80SX8 Gm14723-201ENSMUST00000118686 215 ntBASIC12.33□□□□□ -0.44
Pif1Q80SX8 Gm13369-201ENSMUST00000119442 987 ntBASIC12.33□□□□□ -0.44
Pif1Q80SX8 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.33□□□□□ -0.44
Pif1Q80SX8 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pif1Q80SX8 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.33□□□□□ -0.44
Pif1Q80SX8 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pif1Q80SX8 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pif1Q80SX8 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Pif1Q80SX8 Gm38002-201ENSMUST00000193255 180 ntBASIC12.33□□□□□ -0.44
Pif1Q80SX8 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pif1Q80SX8 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.33□□□□□ -0.44
Pif1Q80SX8 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pif1Q80SX8 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.33□□□□□ -0.44
Pif1Q80SX8 AC132446.1-201ENSMUST00000222655 226 ntBASIC12.33□□□□□ -0.44
Pif1Q80SX8 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pif1Q80SX8 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pif1Q80SX8 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pif1Q80SX8 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pif1Q80SX8 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.44
Pif1Q80SX8 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pif1Q80SX8 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pif1Q80SX8 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pif1Q80SX8 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pif1Q80SX8 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pif1Q80SX8 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pif1Q80SX8 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pif1Q80SX8 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pif1Q80SX8 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pif1Q80SX8 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pif1Q80SX8 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pif1Q80SX8 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pif1Q80SX8 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pif1Q80SX8 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pif1Q80SX8 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pif1Q80SX8 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pif1Q80SX8 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Pif1Q80SX8 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pif1Q80SX8 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pif1Q80SX8 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Pif1Q80SX8 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pif1Q80SX8 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pif1Q80SX8 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pif1Q80SX8 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pif1Q80SX8 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pif1Q80SX8 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.32□□□□□ -0.44
Pif1Q80SX8 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.32□□□□□ -0.44
Pif1Q80SX8 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pif1Q80SX8 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pif1Q80SX8 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pif1Q80SX8 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pif1Q80SX8 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pif1Q80SX8 Gm10268-201ENSMUST00000085340 555 ntBASIC12.32□□□□□ -0.44
Pif1Q80SX8 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pif1Q80SX8 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Pif1Q80SX8 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pif1Q80SX8 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pif1Q80SX8 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pif1Q80SX8 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Pif1Q80SX8 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pif1Q80SX8 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pif1Q80SX8 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pif1Q80SX8 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pif1Q80SX8 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pif1Q80SX8 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms