Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC10.87□□□□□ -0.67
Vma21Q78T54 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
Vma21Q78T54 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Vma21Q78T54 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Vma21Q78T54 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC10.87□□□□□ -0.67
Vma21Q78T54 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC10.87□□□□□ -0.67
Vma21Q78T54 Gm27772-201ENSMUST00000184900 187 ntBASIC10.87□□□□□ -0.67
Vma21Q78T54 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC10.87□□□□□ -0.67
Vma21Q78T54 AC151286.1-201ENSMUST00000198489 145 ntBASIC10.87□□□□□ -0.67
Vma21Q78T54 Gm44344-201ENSMUST00000200287 129 ntBASIC10.87□□□□□ -0.67
Vma21Q78T54 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Vma21Q78T54 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Vma21Q78T54 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Vma21Q78T54 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Vma21Q78T54 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC10.87□□□□□ -0.67
Vma21Q78T54 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Vma21Q78T54 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Vma21Q78T54 Gm5939-201ENSMUST00000119613 2874 ntBASIC10.87□□□□□ -0.67
Vma21Q78T54 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Vma21Q78T54 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Vma21Q78T54 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Vma21Q78T54 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Vma21Q78T54 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC10.87□□□□□ -0.67
Vma21Q78T54 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Vma21Q78T54 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Vma21Q78T54 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Vma21Q78T54 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Vma21Q78T54 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Vma21Q78T54 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Vma21Q78T54 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Vma21Q78T54 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Vma21Q78T54 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Vma21Q78T54 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Vma21Q78T54 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Vma21Q78T54 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Vma21Q78T54 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Vma21Q78T54 Ankra2-208ENSMUST00000226100 1476 ntBASIC10.87□□□□□ -0.67
Vma21Q78T54 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Vma21Q78T54 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Vma21Q78T54 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Vma21Q78T54 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC10.86□□□□□ -0.67
Vma21Q78T54 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Vma21Q78T54 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Vma21Q78T54 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Vma21Q78T54 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Vma21Q78T54 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Vma21Q78T54 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC10.86□□□□□ -0.67
Vma21Q78T54 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Vma21Q78T54 Gm7002-201ENSMUST00000221386 2165 ntBASIC10.86□□□□□ -0.67
Vma21Q78T54 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Vma21Q78T54 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Vma21Q78T54 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Vma21Q78T54 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Vma21Q78T54 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Vma21Q78T54 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Vma21Q78T54 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Vma21Q78T54 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Vma21Q78T54 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC10.86□□□□□ -0.67
Vma21Q78T54 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Vma21Q78T54 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Vma21Q78T54 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC10.86□□□□□ -0.67
Vma21Q78T54 Gm7336-201ENSMUST00000107041 1232 ntBASIC10.86□□□□□ -0.67
Vma21Q78T54 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Vma21Q78T54 Gm14767-201ENSMUST00000121559 586 ntBASIC10.86□□□□□ -0.67
Vma21Q78T54 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC10.86□□□□□ -0.67
Vma21Q78T54 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Vma21Q78T54 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC10.86□□□□□ -0.67
Vma21Q78T54 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
Vma21Q78T54 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Vma21Q78T54 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Vma21Q78T54 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC10.86□□□□□ -0.67
Vma21Q78T54 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC10.86□□□□□ -0.67
Vma21Q78T54 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Vma21Q78T54 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Vma21Q78T54 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Vma21Q78T54 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Vma21Q78T54 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Vma21Q78T54 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Vma21Q78T54 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Vma21Q78T54 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Vma21Q78T54 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Vma21Q78T54 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Vma21Q78T54 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Vma21Q78T54 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Vma21Q78T54 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Vma21Q78T54 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC10.85□□□□□ -0.67
Vma21Q78T54 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Vma21Q78T54 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC10.85□□□□□ -0.67
Vma21Q78T54 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Vma21Q78T54 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Vma21Q78T54 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Vma21Q78T54 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Vma21Q78T54 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Vma21Q78T54 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Vma21Q78T54 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Vma21Q78T54 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Vma21Q78T54 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Vma21Q78T54 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Vma21Q78T54 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Vma21Q78T54 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms