Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scaf4Q6PFF0 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scaf4Q6PFF0 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.14□□□□□ -0.31
Scaf4Q6PFF0 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Scaf4Q6PFF0 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scaf4Q6PFF0 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Scaf4Q6PFF0 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scaf4Q6PFF0 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scaf4Q6PFF0 Gm12585-201ENSMUST00000117307 290 ntBASIC13.14□□□□□ -0.31
Scaf4Q6PFF0 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.14□□□□□ -0.31
Scaf4Q6PFF0 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.14□□□□□ -0.31
Scaf4Q6PFF0 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.14□□□□□ -0.31
Scaf4Q6PFF0 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.14□□□□□ -0.31
Scaf4Q6PFF0 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scaf4Q6PFF0 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Scaf4Q6PFF0 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.14□□□□□ -0.31
Scaf4Q6PFF0 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.14□□□□□ -0.31
Scaf4Q6PFF0 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Scaf4Q6PFF0 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scaf4Q6PFF0 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.14□□□□□ -0.31
Scaf4Q6PFF0 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scaf4Q6PFF0 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scaf4Q6PFF0 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Scaf4Q6PFF0 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scaf4Q6PFF0 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scaf4Q6PFF0 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scaf4Q6PFF0 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scaf4Q6PFF0 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scaf4Q6PFF0 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scaf4Q6PFF0 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Scaf4Q6PFF0 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.13□□□□□ -0.31
Scaf4Q6PFF0 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.13□□□□□ -0.31
Scaf4Q6PFF0 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Scaf4Q6PFF0 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Scaf4Q6PFF0 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Scaf4Q6PFF0 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Scaf4Q6PFF0 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Scaf4Q6PFF0 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Scaf4Q6PFF0 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Scaf4Q6PFF0 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scaf4Q6PFF0 Gm15240-201ENSMUST00000118156 720 ntBASIC13.13□□□□□ -0.31
Scaf4Q6PFF0 Gm15693-201ENSMUST00000120470 637 ntBASIC13.13□□□□□ -0.31
Scaf4Q6PFF0 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.13□□□□□ -0.31
Scaf4Q6PFF0 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Scaf4Q6PFF0 Gm25948-201ENSMUST00000175334 112 ntBASIC13.13□□□□□ -0.31
Scaf4Q6PFF0 Gm27622-201ENSMUST00000183779 60 ntBASIC13.13□□□□□ -0.31
Scaf4Q6PFF0 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Scaf4Q6PFF0 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.13□□□□□ -0.31
Scaf4Q6PFF0 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scaf4Q6PFF0 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scaf4Q6PFF0 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scaf4Q6PFF0 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scaf4Q6PFF0 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Scaf4Q6PFF0 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scaf4Q6PFF0 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.13□□□□□ -0.31
Scaf4Q6PFF0 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Scaf4Q6PFF0 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scaf4Q6PFF0 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scaf4Q6PFF0 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scaf4Q6PFF0 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scaf4Q6PFF0 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Scaf4Q6PFF0 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Scaf4Q6PFF0 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.12□□□□□ -0.31
Scaf4Q6PFF0 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Scaf4Q6PFF0 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scaf4Q6PFF0 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Scaf4Q6PFF0 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scaf4Q6PFF0 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scaf4Q6PFF0 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scaf4Q6PFF0 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Scaf4Q6PFF0 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.12□□□□□ -0.31
Scaf4Q6PFF0 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scaf4Q6PFF0 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scaf4Q6PFF0 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scaf4Q6PFF0 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scaf4Q6PFF0 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.12□□□□□ -0.31
Scaf4Q6PFF0 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scaf4Q6PFF0 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.12□□□□□ -0.31
Scaf4Q6PFF0 Gm10253-201ENSMUST00000194270 940 ntBASIC13.12□□□□□ -0.31
Scaf4Q6PFF0 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC13.12□□□□□ -0.31
Scaf4Q6PFF0 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.12□□□□□ -0.31
Scaf4Q6PFF0 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.12□□□□□ -0.31
Scaf4Q6PFF0 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.12□□□□□ -0.31
Scaf4Q6PFF0 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scaf4Q6PFF0 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scaf4Q6PFF0 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Scaf4Q6PFF0 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scaf4Q6PFF0 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scaf4Q6PFF0 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scaf4Q6PFF0 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scaf4Q6PFF0 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scaf4Q6PFF0 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scaf4Q6PFF0 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Scaf4Q6PFF0 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scaf4Q6PFF0 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.12□□□□□ -0.31
Scaf4Q6PFF0 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scaf4Q6PFF0 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Scaf4Q6PFF0 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scaf4Q6PFF0 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.12□□□□□ -0.31
Scaf4Q6PFF0 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms