Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Snrnp40Q6PE01 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Snrnp40Q6PE01 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Snrnp40Q6PE01 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Snrnp40Q6PE01 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC11.69□□□□□ -0.54
Snrnp40Q6PE01 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Snrnp40Q6PE01 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Snrnp40Q6PE01 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Snrnp40Q6PE01 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Snrnp40Q6PE01 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Snrnp40Q6PE01 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Snrnp40Q6PE01 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Snrnp40Q6PE01 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Snrnp40Q6PE01 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
Snrnp40Q6PE01 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC11.68□□□□□ -0.54
Snrnp40Q6PE01 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Snrnp40Q6PE01 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Snrnp40Q6PE01 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.68□□□□□ -0.54
Snrnp40Q6PE01 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Snrnp40Q6PE01 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Snrnp40Q6PE01 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Snrnp40Q6PE01 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Snrnp40Q6PE01 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Snrnp40Q6PE01 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Snrnp40Q6PE01 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Snrnp40Q6PE01 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.68□□□□□ -0.54
Snrnp40Q6PE01 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Snrnp40Q6PE01 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.68□□□□□ -0.54
Snrnp40Q6PE01 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Snrnp40Q6PE01 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Snrnp40Q6PE01 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.68□□□□□ -0.54
Snrnp40Q6PE01 Mir6979-201ENSMUST00000183927 56 ntBASIC11.68□□□□□ -0.54
Snrnp40Q6PE01 Gm2260-201ENSMUST00000184965 657 ntBASIC11.68□□□□□ -0.54
Snrnp40Q6PE01 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.68□□□□□ -0.54
Snrnp40Q6PE01 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.68□□□□□ -0.54
Snrnp40Q6PE01 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.68□□□□□ -0.54
Snrnp40Q6PE01 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.68□□□□□ -0.54
Snrnp40Q6PE01 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.68□□□□□ -0.54
Snrnp40Q6PE01 Gm6458-201ENSMUST00000211573 635 ntBASIC11.68□□□□□ -0.54
Snrnp40Q6PE01 Gm18212-201ENSMUST00000211678 889 ntBASIC11.68□□□□□ -0.54
Snrnp40Q6PE01 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
Snrnp40Q6PE01 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Snrnp40Q6PE01 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Snrnp40Q6PE01 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Snrnp40Q6PE01 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Snrnp40Q6PE01 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Snrnp40Q6PE01 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Snrnp40Q6PE01 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Snrnp40Q6PE01 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Snrnp40Q6PE01 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Snrnp40Q6PE01 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Snrnp40Q6PE01 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Snrnp40Q6PE01 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Snrnp40Q6PE01 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC11.68□□□□□ -0.54
Snrnp40Q6PE01 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Snrnp40Q6PE01 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Snrnp40Q6PE01 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Snrnp40Q6PE01 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Snrnp40Q6PE01 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC11.68□□□□□ -0.54
Snrnp40Q6PE01 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.68□□□□□ -0.54
Snrnp40Q6PE01 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Snrnp40Q6PE01 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Snrnp40Q6PE01 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Snrnp40Q6PE01 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Snrnp40Q6PE01 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Snrnp40Q6PE01 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC11.68□□□□□ -0.54
Snrnp40Q6PE01 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC11.68□□□□□ -0.54
Snrnp40Q6PE01 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Snrnp40Q6PE01 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Snrnp40Q6PE01 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.67□□□□□ -0.54
Snrnp40Q6PE01 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Snrnp40Q6PE01 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Snrnp40Q6PE01 AC139054.1-201ENSMUST00000226898 1598 ntBASIC11.67□□□□□ -0.54
Snrnp40Q6PE01 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Snrnp40Q6PE01 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Snrnp40Q6PE01 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Snrnp40Q6PE01 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.67□□□□□ -0.54
Snrnp40Q6PE01 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Snrnp40Q6PE01 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC11.67□□□□□ -0.54
Snrnp40Q6PE01 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.67□□□□□ -0.54
Snrnp40Q6PE01 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Snrnp40Q6PE01 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Snrnp40Q6PE01 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Snrnp40Q6PE01 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Snrnp40Q6PE01 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.67□□□□□ -0.54
Snrnp40Q6PE01 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.67□□□□□ -0.54
Snrnp40Q6PE01 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Snrnp40Q6PE01 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Snrnp40Q6PE01 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Snrnp40Q6PE01 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Snrnp40Q6PE01 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Snrnp40Q6PE01 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Snrnp40Q6PE01 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Snrnp40Q6PE01 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Snrnp40Q6PE01 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Snrnp40Q6PE01 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Snrnp40Q6PE01 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC11.66□□□□□ -0.54
Snrnp40Q6PE01 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Snrnp40Q6PE01 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Snrnp40Q6PE01 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms