Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ParpbpQ6IRT3 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ParpbpQ6IRT3 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ParpbpQ6IRT3 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ParpbpQ6IRT3 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ParpbpQ6IRT3 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ParpbpQ6IRT3 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
ParpbpQ6IRT3 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.54□□□□□ -0.4
ParpbpQ6IRT3 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
ParpbpQ6IRT3 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
ParpbpQ6IRT3 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ParpbpQ6IRT3 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ParpbpQ6IRT3 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ParpbpQ6IRT3 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
ParpbpQ6IRT3 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
ParpbpQ6IRT3 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
ParpbpQ6IRT3 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
ParpbpQ6IRT3 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ParpbpQ6IRT3 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.53□□□□□ -0.4
ParpbpQ6IRT3 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.53□□□□□ -0.4
ParpbpQ6IRT3 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.53□□□□□ -0.4
ParpbpQ6IRT3 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ParpbpQ6IRT3 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
ParpbpQ6IRT3 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
ParpbpQ6IRT3 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
ParpbpQ6IRT3 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.53□□□□□ -0.4
ParpbpQ6IRT3 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.53□□□□□ -0.4
ParpbpQ6IRT3 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ParpbpQ6IRT3 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
ParpbpQ6IRT3 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ParpbpQ6IRT3 Gm28631-201ENSMUST00000190740 334 ntBASIC12.53□□□□□ -0.4
ParpbpQ6IRT3 Gm37917-201ENSMUST00000194711 392 ntBASIC12.53□□□□□ -0.4
ParpbpQ6IRT3 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.53□□□□□ -0.4
ParpbpQ6IRT3 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.53□□□□□ -0.4
ParpbpQ6IRT3 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.53□□□□□ -0.4
ParpbpQ6IRT3 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ParpbpQ6IRT3 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ParpbpQ6IRT3 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
ParpbpQ6IRT3 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ParpbpQ6IRT3 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.53□□□□□ -0.4
ParpbpQ6IRT3 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ParpbpQ6IRT3 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.53□□□□□ -0.4
ParpbpQ6IRT3 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ParpbpQ6IRT3 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
ParpbpQ6IRT3 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ParpbpQ6IRT3 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
ParpbpQ6IRT3 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
ParpbpQ6IRT3 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.53□□□□□ -0.4
ParpbpQ6IRT3 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ParpbpQ6IRT3 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
ParpbpQ6IRT3 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
ParpbpQ6IRT3 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ParpbpQ6IRT3 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ParpbpQ6IRT3 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
ParpbpQ6IRT3 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ParpbpQ6IRT3 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
ParpbpQ6IRT3 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ParpbpQ6IRT3 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
ParpbpQ6IRT3 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
ParpbpQ6IRT3 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
ParpbpQ6IRT3 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.52□□□□□ -0.4
ParpbpQ6IRT3 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ParpbpQ6IRT3 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.52□□□□□ -0.4
ParpbpQ6IRT3 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
ParpbpQ6IRT3 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ParpbpQ6IRT3 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ParpbpQ6IRT3 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
ParpbpQ6IRT3 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ParpbpQ6IRT3 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
ParpbpQ6IRT3 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.52□□□□□ -0.41
ParpbpQ6IRT3 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ParpbpQ6IRT3 Gm11524-201ENSMUST00000119349 807 ntBASIC12.52□□□□□ -0.41
ParpbpQ6IRT3 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.52□□□□□ -0.41
ParpbpQ6IRT3 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.52□□□□□ -0.41
ParpbpQ6IRT3 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ParpbpQ6IRT3 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ParpbpQ6IRT3 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ParpbpQ6IRT3 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.52□□□□□ -0.41
ParpbpQ6IRT3 Gm19078-201ENSMUST00000206311 727 ntBASIC12.52□□□□□ -0.41
ParpbpQ6IRT3 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ParpbpQ6IRT3 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
ParpbpQ6IRT3 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
ParpbpQ6IRT3 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
ParpbpQ6IRT3 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
ParpbpQ6IRT3 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
ParpbpQ6IRT3 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
ParpbpQ6IRT3 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
ParpbpQ6IRT3 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.52□□□□□ -0.41
ParpbpQ6IRT3 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ParpbpQ6IRT3 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.52□□□□□ -0.41
ParpbpQ6IRT3 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ParpbpQ6IRT3 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ParpbpQ6IRT3 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ParpbpQ6IRT3 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
ParpbpQ6IRT3 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ParpbpQ6IRT3 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
ParpbpQ6IRT3 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ParpbpQ6IRT3 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ParpbpQ6IRT3 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ParpbpQ6IRT3 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms