Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Krt39Q6IFX4 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Krt39Q6IFX4 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Krt39Q6IFX4 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Krt39Q6IFX4 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Krt39Q6IFX4 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Krt39Q6IFX4 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.75□□□□□ -0.05
Krt39Q6IFX4 Gm42863-201ENSMUST00000197875 2958 ntBASIC14.75□□□□□ -0.05
Krt39Q6IFX4 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Krt39Q6IFX4 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Krt39Q6IFX4 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Krt39Q6IFX4 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Krt39Q6IFX4 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.75□□□□□ -0.05
Krt39Q6IFX4 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Krt39Q6IFX4 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Krt39Q6IFX4 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Krt39Q6IFX4 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Krt39Q6IFX4 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Krt39Q6IFX4 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Krt39Q6IFX4 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.74□□□□□ -0.05
Krt39Q6IFX4 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Krt39Q6IFX4 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Krt39Q6IFX4 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC14.74□□□□□ -0.05
Krt39Q6IFX4 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Krt39Q6IFX4 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC14.74□□□□□ -0.05
Krt39Q6IFX4 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC14.74□□□□□ -0.05
Krt39Q6IFX4 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC14.74□□□□□ -0.05
Krt39Q6IFX4 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Krt39Q6IFX4 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Krt39Q6IFX4 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.74□□□□□ -0.05
Krt39Q6IFX4 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Krt39Q6IFX4 Gm18905-201ENSMUST00000205454 928 ntBASIC14.74□□□□□ -0.05
Krt39Q6IFX4 Gm20949-201ENSMUST00000206478 952 ntBASIC14.74□□□□□ -0.05
Krt39Q6IFX4 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Krt39Q6IFX4 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Krt39Q6IFX4 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Krt39Q6IFX4 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Krt39Q6IFX4 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Krt39Q6IFX4 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Krt39Q6IFX4 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
Krt39Q6IFX4 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC14.74□□□□□ -0.05
Krt39Q6IFX4 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Krt39Q6IFX4 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Krt39Q6IFX4 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Krt39Q6IFX4 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Krt39Q6IFX4 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Krt39Q6IFX4 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Krt39Q6IFX4 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Krt39Q6IFX4 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Krt39Q6IFX4 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Krt39Q6IFX4 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Krt39Q6IFX4 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Krt39Q6IFX4 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Krt39Q6IFX4 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Krt39Q6IFX4 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Krt39Q6IFX4 Gm4875-201ENSMUST00000118257 786 ntBASIC14.73□□□□□ -0.05
Krt39Q6IFX4 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.73□□□□□ -0.05
Krt39Q6IFX4 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.73□□□□□ -0.05
Krt39Q6IFX4 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC14.73□□□□□ -0.05
Krt39Q6IFX4 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Krt39Q6IFX4 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Krt39Q6IFX4 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Krt39Q6IFX4 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.73□□□□□ -0.05
Krt39Q6IFX4 Gm7390-201ENSMUST00000212452 1216 ntBASIC14.73□□□□□ -0.05
Krt39Q6IFX4 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.73□□□□□ -0.05
Krt39Q6IFX4 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Krt39Q6IFX4 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Krt39Q6IFX4 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Krt39Q6IFX4 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Krt39Q6IFX4 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Krt39Q6IFX4 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Krt39Q6IFX4 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Krt39Q6IFX4 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Krt39Q6IFX4 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Krt39Q6IFX4 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
Krt39Q6IFX4 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Krt39Q6IFX4 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Krt39Q6IFX4 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Krt39Q6IFX4 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC14.73□□□□□ -0.05
Krt39Q6IFX4 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC14.72□□□□□ -0.05
Krt39Q6IFX4 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Krt39Q6IFX4 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Krt39Q6IFX4 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Krt39Q6IFX4 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Krt39Q6IFX4 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Krt39Q6IFX4 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Krt39Q6IFX4 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Krt39Q6IFX4 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC14.72□□□□□ -0.05
Krt39Q6IFX4 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Krt39Q6IFX4 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Krt39Q6IFX4 Gm27196-201ENSMUST00000184787 2582 ntBASIC14.72□□□□□ -0.05
Krt39Q6IFX4 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Krt39Q6IFX4 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Krt39Q6IFX4 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Krt39Q6IFX4 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.72□□□□□ -0.05
Krt39Q6IFX4 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.72□□□□□ -0.05
Krt39Q6IFX4 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.72□□□□□ -0.05
Krt39Q6IFX4 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.72□□□□□ -0.05
Krt39Q6IFX4 Gm12403-201ENSMUST00000121384 959 ntBASIC14.72□□□□□ -0.05
Krt39Q6IFX4 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms