Protein–RNA interactions for Protein: Q69ZS0

Pdzrn3, E3 ubiquitin-protein ligase PDZRN3, mousemouse

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzrn3Q69ZS0 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pdzrn3Q69ZS0 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Pdzrn3Q69ZS0 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pdzrn3Q69ZS0 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pdzrn3Q69ZS0 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pdzrn3Q69ZS0 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pdzrn3Q69ZS0 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pdzrn3Q69ZS0 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pdzrn3Q69ZS0 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pdzrn3Q69ZS0 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
Pdzrn3Q69ZS0 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pdzrn3Q69ZS0 Gm15770-201ENSMUST00000117498 584 ntBASIC16.31■□□□□ 0.2
Pdzrn3Q69ZS0 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pdzrn3Q69ZS0 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC16.31■□□□□ 0.2
Pdzrn3Q69ZS0 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC16.31■□□□□ 0.2
Pdzrn3Q69ZS0 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC16.31■□□□□ 0.2
Pdzrn3Q69ZS0 Gm26927-201ENSMUST00000182385 965 ntBASIC16.31■□□□□ 0.2
Pdzrn3Q69ZS0 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC16.31■□□□□ 0.2
Pdzrn3Q69ZS0 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC16.31■□□□□ 0.2
Pdzrn3Q69ZS0 AC131997.1-201ENSMUST00000228611 1229 ntBASIC16.31■□□□□ 0.2
Pdzrn3Q69ZS0 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pdzrn3Q69ZS0 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pdzrn3Q69ZS0 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pdzrn3Q69ZS0 Gm10268-201ENSMUST00000085340 555 ntBASIC16.31■□□□□ 0.2
Pdzrn3Q69ZS0 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Pdzrn3Q69ZS0 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pdzrn3Q69ZS0 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Pdzrn3Q69ZS0 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pdzrn3Q69ZS0 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pdzrn3Q69ZS0 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pdzrn3Q69ZS0 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pdzrn3Q69ZS0 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Pdzrn3Q69ZS0 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pdzrn3Q69ZS0 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pdzrn3Q69ZS0 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pdzrn3Q69ZS0 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pdzrn3Q69ZS0 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pdzrn3Q69ZS0 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pdzrn3Q69ZS0 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pdzrn3Q69ZS0 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pdzrn3Q69ZS0 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pdzrn3Q69ZS0 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pdzrn3Q69ZS0 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pdzrn3Q69ZS0 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pdzrn3Q69ZS0 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pdzrn3Q69ZS0 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pdzrn3Q69ZS0 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC16.3■□□□□ 0.2
Pdzrn3Q69ZS0 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC16.3■□□□□ 0.2
Pdzrn3Q69ZS0 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pdzrn3Q69ZS0 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Pdzrn3Q69ZS0 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC16.3■□□□□ 0.2
Pdzrn3Q69ZS0 Gm27243-201ENSMUST00000183964 521 ntBASIC16.3■□□□□ 0.2
Pdzrn3Q69ZS0 Gm27516-201ENSMUST00000184237 98 ntBASIC16.3■□□□□ 0.2
Pdzrn3Q69ZS0 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC16.3■□□□□ 0.2
Pdzrn3Q69ZS0 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Pdzrn3Q69ZS0 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Pdzrn3Q69ZS0 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pdzrn3Q69ZS0 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Pdzrn3Q69ZS0 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pdzrn3Q69ZS0 Gm28386-201ENSMUST00000189147 1849 ntBASIC16.3■□□□□ 0.2
Pdzrn3Q69ZS0 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pdzrn3Q69ZS0 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pdzrn3Q69ZS0 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC16.3■□□□□ 0.2
Pdzrn3Q69ZS0 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pdzrn3Q69ZS0 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC16.29■□□□□ 0.2
Pdzrn3Q69ZS0 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pdzrn3Q69ZS0 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pdzrn3Q69ZS0 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC16.29■□□□□ 0.2
Pdzrn3Q69ZS0 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pdzrn3Q69ZS0 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pdzrn3Q69ZS0 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Pdzrn3Q69ZS0 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC16.29■□□□□ 0.2
Pdzrn3Q69ZS0 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pdzrn3Q69ZS0 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pdzrn3Q69ZS0 Gm5620-201ENSMUST00000077991 1348 ntBASIC16.29■□□□□ 0.2
Pdzrn3Q69ZS0 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pdzrn3Q69ZS0 Gm10327-201ENSMUST00000105222 1002 ntBASIC16.29■□□□□ 0.2
Pdzrn3Q69ZS0 Gm13350-201ENSMUST00000120519 479 ntBASIC16.29■□□□□ 0.2
Pdzrn3Q69ZS0 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pdzrn3Q69ZS0 Gm29608-201ENSMUST00000190444 463 ntBASIC16.29■□□□□ 0.2
Pdzrn3Q69ZS0 Gm37497-201ENSMUST00000195830 798 ntBASIC16.29■□□□□ 0.2
Pdzrn3Q69ZS0 Gm7783-201ENSMUST00000204795 781 ntBASIC16.29■□□□□ 0.2
Pdzrn3Q69ZS0 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
Pdzrn3Q69ZS0 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pdzrn3Q69ZS0 Gm18934-201ENSMUST00000216671 1044 ntBASIC16.29■□□□□ 0.2
Pdzrn3Q69ZS0 AC140406.1-201ENSMUST00000226481 465 ntBASIC16.29■□□□□ 0.2
Pdzrn3Q69ZS0 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC16.29■□□□□ 0.2
Pdzrn3Q69ZS0 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Pdzrn3Q69ZS0 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pdzrn3Q69ZS0 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC16.29■□□□□ 0.2
Pdzrn3Q69ZS0 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pdzrn3Q69ZS0 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pdzrn3Q69ZS0 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pdzrn3Q69ZS0 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC16.29■□□□□ 0.2
Pdzrn3Q69ZS0 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pdzrn3Q69ZS0 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pdzrn3Q69ZS0 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Pdzrn3Q69ZS0 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pdzrn3Q69ZS0 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pdzrn3Q69ZS0 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms