Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col11a2Q64739 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col11a2Q64739 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col11a2Q64739 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col11a2Q64739 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC15.75■□□□□ 0.11
Col11a2Q64739 Gm14058-201ENSMUST00000116082 735 ntBASIC15.75■□□□□ 0.11
Col11a2Q64739 Gm15711-201ENSMUST00000118889 535 ntBASIC15.75■□□□□ 0.11
Col11a2Q64739 H2-Q3-201ENSMUST00000172583 608 ntBASIC15.75■□□□□ 0.11
Col11a2Q64739 Gm5732-201ENSMUST00000182596 1007 ntBASIC15.75■□□□□ 0.11
Col11a2Q64739 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC15.75■□□□□ 0.11
Col11a2Q64739 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Col11a2Q64739 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col11a2Q64739 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col11a2Q64739 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Col11a2Q64739 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Col11a2Q64739 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Col11a2Q64739 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Col11a2Q64739 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col11a2Q64739 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col11a2Q64739 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col11a2Q64739 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Col11a2Q64739 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC15.75■□□□□ 0.11
Col11a2Q64739 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col11a2Q64739 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Col11a2Q64739 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Col11a2Q64739 Gm12165-201ENSMUST00000117047 342 ntBASIC15.74■□□□□ 0.11
Col11a2Q64739 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Col11a2Q64739 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC15.74■□□□□ 0.11
Col11a2Q64739 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC15.74■□□□□ 0.11
Col11a2Q64739 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC15.74■□□□□ 0.11
Col11a2Q64739 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC15.74■□□□□ 0.11
Col11a2Q64739 Gm19931-201ENSMUST00000198920 368 ntBASIC15.74■□□□□ 0.11
Col11a2Q64739 Aprt-ps-201ENSMUST00000212311 505 ntBASIC15.74■□□□□ 0.11
Col11a2Q64739 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Col11a2Q64739 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Col11a2Q64739 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col11a2Q64739 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Col11a2Q64739 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC15.74■□□□□ 0.11
Col11a2Q64739 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Col11a2Q64739 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col11a2Q64739 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col11a2Q64739 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Col11a2Q64739 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col11a2Q64739 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Col11a2Q64739 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col11a2Q64739 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Col11a2Q64739 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col11a2Q64739 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Col11a2Q64739 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col11a2Q64739 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col11a2Q64739 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col11a2Q64739 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col11a2Q64739 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col11a2Q64739 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Col11a2Q64739 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Col11a2Q64739 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC15.74■□□□□ 0.11
Col11a2Q64739 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC15.74■□□□□ 0.11
Col11a2Q64739 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Col11a2Q64739 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC15.74■□□□□ 0.11
Col11a2Q64739 AY036118-201ENSMUST00000200021 923 ntBASIC15.74■□□□□ 0.11
Col11a2Q64739 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col11a2Q64739 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Col11a2Q64739 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC15.73■□□□□ 0.11
Col11a2Q64739 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col11a2Q64739 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Col11a2Q64739 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col11a2Q64739 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col11a2Q64739 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col11a2Q64739 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC15.73■□□□□ 0.11
Col11a2Q64739 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col11a2Q64739 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Col11a2Q64739 Gm44094-201ENSMUST00000204703 2030 ntBASIC15.73■□□□□ 0.11
Col11a2Q64739 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Col11a2Q64739 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col11a2Q64739 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Col11a2Q64739 Mir680-2-201ENSMUST00000102163 110 ntBASIC15.73■□□□□ 0.11
Col11a2Q64739 Gm23251-201ENSMUST00000103773 110 ntBASIC15.73■□□□□ 0.11
Col11a2Q64739 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Col11a2Q64739 Gm12029-201ENSMUST00000120073 832 ntBASIC15.73■□□□□ 0.11
Col11a2Q64739 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC15.73■□□□□ 0.11
Col11a2Q64739 Gm28882-201ENSMUST00000185504 314 ntBASIC15.73■□□□□ 0.11
Col11a2Q64739 Mir7686-201ENSMUST00000200604 57 ntBASIC15.73■□□□□ 0.11
Col11a2Q64739 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col11a2Q64739 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Col11a2Q64739 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Col11a2Q64739 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col11a2Q64739 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Col11a2Q64739 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col11a2Q64739 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col11a2Q64739 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Col11a2Q64739 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
Col11a2Q64739 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col11a2Q64739 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col11a2Q64739 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Col11a2Q64739 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Col11a2Q64739 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col11a2Q64739 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col11a2Q64739 Gm14150-201ENSMUST00000122404 1354 ntBASIC15.72■□□□□ 0.11
Col11a2Q64739 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Col11a2Q64739 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms