Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC10.26□□□□□ -0.77
Notch3Q61982 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC10.26□□□□□ -0.77
Notch3Q61982 Gm24420-201ENSMUST00000176676 59 ntBASIC10.26□□□□□ -0.77
Notch3Q61982 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC10.26□□□□□ -0.77
Notch3Q61982 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Notch3Q61982 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC10.26□□□□□ -0.77
Notch3Q61982 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC10.26□□□□□ -0.77
Notch3Q61982 Gm44397-201ENSMUST00000195950 113 ntBASIC10.26□□□□□ -0.77
Notch3Q61982 Gm43118-201ENSMUST00000199149 775 ntBASIC10.26□□□□□ -0.77
Notch3Q61982 Gm18473-201ENSMUST00000220543 868 ntBASIC10.26□□□□□ -0.77
Notch3Q61982 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC10.26□□□□□ -0.77
Notch3Q61982 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Notch3Q61982 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Notch3Q61982 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Notch3Q61982 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Notch3Q61982 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC10.26□□□□□ -0.77
Notch3Q61982 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Notch3Q61982 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Notch3Q61982 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Notch3Q61982 AC159196.2-201ENSMUST00000224082 1622 ntBASIC10.26□□□□□ -0.77
Notch3Q61982 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Notch3Q61982 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
Notch3Q61982 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Notch3Q61982 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Notch3Q61982 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Notch3Q61982 Gm27501-201ENSMUST00000183599 107 ntBASIC10.25□□□□□ -0.77
Notch3Q61982 Gm27243-201ENSMUST00000183964 521 ntBASIC10.25□□□□□ -0.77
Notch3Q61982 Gm30238-201ENSMUST00000195528 2603 ntBASIC10.25□□□□□ -0.77
Notch3Q61982 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Notch3Q61982 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Notch3Q61982 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Notch3Q61982 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Notch3Q61982 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Notch3Q61982 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Notch3Q61982 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC10.25□□□□□ -0.77
Notch3Q61982 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Notch3Q61982 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Notch3Q61982 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Notch3Q61982 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Notch3Q61982 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Notch3Q61982 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC10.25□□□□□ -0.77
Notch3Q61982 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Notch3Q61982 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Notch3Q61982 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Notch3Q61982 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC10.25□□□□□ -0.77
Notch3Q61982 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Notch3Q61982 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Notch3Q61982 Gm12329-201ENSMUST00000120829 1007 ntBASIC10.25□□□□□ -0.77
Notch3Q61982 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Notch3Q61982 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC10.25□□□□□ -0.77
Notch3Q61982 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC10.25□□□□□ -0.77
Notch3Q61982 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC10.25□□□□□ -0.77
Notch3Q61982 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Notch3Q61982 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Notch3Q61982 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Notch3Q61982 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Notch3Q61982 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC10.25□□□□□ -0.77
Notch3Q61982 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Notch3Q61982 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Notch3Q61982 Gm37015-201ENSMUST00000192763 1521 ntBASIC10.25□□□□□ -0.77
Notch3Q61982 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Notch3Q61982 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Notch3Q61982 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Notch3Q61982 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Notch3Q61982 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Notch3Q61982 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC10.25□□□□□ -0.77
Notch3Q61982 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Notch3Q61982 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Notch3Q61982 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC10.25□□□□□ -0.77
Notch3Q61982 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Notch3Q61982 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Notch3Q61982 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Notch3Q61982 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
Notch3Q61982 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Notch3Q61982 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Notch3Q61982 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Notch3Q61982 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Notch3Q61982 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Notch3Q61982 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Notch3Q61982 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC10.24□□□□□ -0.77
Notch3Q61982 Gm6152-201ENSMUST00000151704 340 ntBASIC10.24□□□□□ -0.77
Notch3Q61982 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Notch3Q61982 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC10.24□□□□□ -0.77
Notch3Q61982 Gm27572-201ENSMUST00000183702 255 ntBASIC10.24□□□□□ -0.77
Notch3Q61982 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC10.24□□□□□ -0.77
Notch3Q61982 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC10.24□□□□□ -0.77
Notch3Q61982 AC155237.1-201ENSMUST00000226196 1279 ntBASIC10.24□□□□□ -0.77
Notch3Q61982 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Notch3Q61982 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Notch3Q61982 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Notch3Q61982 Plec-206ENSMUST00000074834 14855 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Notch3Q61982 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Notch3Q61982 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Notch3Q61982 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Notch3Q61982 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC10.24□□□□□ -0.77
Notch3Q61982 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Notch3Q61982 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Notch3Q61982 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Notch3Q61982 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC10.24□□□□□ -0.77
Notch3Q61982 Matn2-206ENSMUST00000228570 2798 ntBASIC10.24□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms