Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col12a1Q60847 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col12a1Q60847 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Col12a1Q60847 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Col12a1Q60847 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col12a1Q60847 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col12a1Q60847 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col12a1Q60847 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col12a1Q60847 Mir671-201ENSMUST00000102432 98 ntBASIC12.82□□□□□ -0.36
Col12a1Q60847 Gm11354-201ENSMUST00000121974 422 ntBASIC12.82□□□□□ -0.36
Col12a1Q60847 Gm12628-201ENSMUST00000122193 382 ntBASIC12.82□□□□□ -0.36
Col12a1Q60847 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.82□□□□□ -0.36
Col12a1Q60847 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.82□□□□□ -0.36
Col12a1Q60847 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.82□□□□□ -0.36
Col12a1Q60847 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC12.82□□□□□ -0.36
Col12a1Q60847 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col12a1Q60847 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.82□□□□□ -0.36
Col12a1Q60847 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col12a1Q60847 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col12a1Q60847 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col12a1Q60847 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col12a1Q60847 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col12a1Q60847 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Col12a1Q60847 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col12a1Q60847 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC12.82□□□□□ -0.36
Col12a1Q60847 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Col12a1Q60847 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col12a1Q60847 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col12a1Q60847 Mir7076-201ENSMUST00000183519 74 ntBASIC12.82□□□□□ -0.36
Col12a1Q60847 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Col12a1Q60847 Mir7686-201ENSMUST00000200604 57 ntBASIC12.82□□□□□ -0.36
Col12a1Q60847 Gm3793-201ENSMUST00000204973 672 ntBASIC12.82□□□□□ -0.36
Col12a1Q60847 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.82□□□□□ -0.36
Col12a1Q60847 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col12a1Q60847 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col12a1Q60847 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Col12a1Q60847 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Col12a1Q60847 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Col12a1Q60847 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col12a1Q60847 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.82□□□□□ -0.36
Col12a1Q60847 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col12a1Q60847 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col12a1Q60847 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col12a1Q60847 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.82□□□□□ -0.36
Col12a1Q60847 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.82□□□□□ -0.36
Col12a1Q60847 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Col12a1Q60847 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col12a1Q60847 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col12a1Q60847 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.82□□□□□ -0.36
Col12a1Q60847 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.82□□□□□ -0.36
Col12a1Q60847 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col12a1Q60847 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC12.82□□□□□ -0.36
Col12a1Q60847 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col12a1Q60847 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col12a1Q60847 Gm43610-201ENSMUST00000199117 365 ntBASIC12.82□□□□□ -0.36
Col12a1Q60847 AC171241.1-201ENSMUST00000228144 1166 ntBASIC12.82□□□□□ -0.36
Col12a1Q60847 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col12a1Q60847 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col12a1Q60847 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Col12a1Q60847 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col12a1Q60847 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col12a1Q60847 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col12a1Q60847 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Col12a1Q60847 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col12a1Q60847 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col12a1Q60847 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col12a1Q60847 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col12a1Q60847 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.81□□□□□ -0.36
Col12a1Q60847 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC12.81□□□□□ -0.36
Col12a1Q60847 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.81□□□□□ -0.36
Col12a1Q60847 AY036118-201ENSMUST00000200021 923 ntBASIC12.81□□□□□ -0.36
Col12a1Q60847 AC126799.1-201ENSMUST00000221976 246 ntBASIC12.81□□□□□ -0.36
Col12a1Q60847 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC12.81□□□□□ -0.36
Col12a1Q60847 AC154290.1-201ENSMUST00000223786 1240 ntBASIC12.81□□□□□ -0.36
Col12a1Q60847 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Col12a1Q60847 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col12a1Q60847 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col12a1Q60847 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col12a1Q60847 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col12a1Q60847 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col12a1Q60847 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col12a1Q60847 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col12a1Q60847 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col12a1Q60847 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col12a1Q60847 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.81□□□□□ -0.36
Col12a1Q60847 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Col12a1Q60847 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Col12a1Q60847 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Col12a1Q60847 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col12a1Q60847 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.8□□□□□ -0.36
Col12a1Q60847 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col12a1Q60847 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col12a1Q60847 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col12a1Q60847 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col12a1Q60847 Gm12948-201ENSMUST00000119406 682 ntBASIC12.8□□□□□ -0.36
Col12a1Q60847 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col12a1Q60847 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col12a1Q60847 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col12a1Q60847 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col12a1Q60847 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms