Protein–RNA interactions for Protein: Q60688

Foxd4, Forkhead box protein D4, mousemouse

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd4Q60688 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Foxd4Q60688 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Foxd4Q60688 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Foxd4Q60688 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.94□□□□□ -0.18
Foxd4Q60688 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Foxd4Q60688 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
Foxd4Q60688 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Foxd4Q60688 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Foxd4Q60688 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Foxd4Q60688 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.94□□□□□ -0.18
Foxd4Q60688 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Foxd4Q60688 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Foxd4Q60688 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Foxd4Q60688 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Foxd4Q60688 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Foxd4Q60688 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Foxd4Q60688 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Foxd4Q60688 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Foxd4Q60688 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Foxd4Q60688 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.94□□□□□ -0.18
Foxd4Q60688 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Foxd4Q60688 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Foxd4Q60688 Gm15957-201ENSMUST00000118893 974 ntBASIC13.94□□□□□ -0.18
Foxd4Q60688 Olfr1118-201ENSMUST00000121296 996 ntAPPRIS P2 BASIC13.94□□□□□ -0.18
Foxd4Q60688 Mir1897-201ENSMUST00000122581 272 ntBASIC13.94□□□□□ -0.18
Foxd4Q60688 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.94□□□□□ -0.18
Foxd4Q60688 Dctd-205ENSMUST00000174278 799 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Foxd4Q60688 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Foxd4Q60688 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Foxd4Q60688 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Foxd4Q60688 Gm28438-201ENSMUST00000188299 345 ntBASIC13.94□□□□□ -0.18
Foxd4Q60688 Gm38313-201ENSMUST00000191953 1266 ntBASIC13.94□□□□□ -0.18
Foxd4Q60688 Gm43787-201ENSMUST00000197792 1037 ntBASIC13.94□□□□□ -0.18
Foxd4Q60688 Gm43055-201ENSMUST00000198859 879 ntTSL 3 BASIC13.94□□□□□ -0.18
Foxd4Q60688 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Foxd4Q60688 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Foxd4Q60688 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Foxd4Q60688 Gm36287-201ENSMUST00000223481 796 ntTSL 5 BASIC13.94□□□□□ -0.18
Foxd4Q60688 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC13.94□□□□□ -0.18
Foxd4Q60688 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Foxd4Q60688 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Foxd4Q60688 Acrbp-201ENSMUST00000032481 584 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Foxd4Q60688 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Foxd4Q60688 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Foxd4Q60688 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Foxd4Q60688 Manf-201ENSMUST00000069036 960 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Foxd4Q60688 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Foxd4Q60688 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Foxd4Q60688 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Foxd4Q60688 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Foxd4Q60688 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.94□□□□□ -0.18
Foxd4Q60688 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Foxd4Q60688 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Foxd4Q60688 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Foxd4Q60688 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Foxd4Q60688 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Foxd4Q60688 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Foxd4Q60688 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Foxd4Q60688 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.94□□□□□ -0.18
Foxd4Q60688 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Foxd4Q60688 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Foxd4Q60688 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Foxd4Q60688 Gm43052-201ENSMUST00000201451 1628 ntBASIC13.93□□□□□ -0.18
Foxd4Q60688 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Foxd4Q60688 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Foxd4Q60688 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Foxd4Q60688 Cd3e-201ENSMUST00000102832 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Foxd4Q60688 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
Foxd4Q60688 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.93□□□□□ -0.18
Foxd4Q60688 A430018G15Rik-201ENSMUST00000124210 1314 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Foxd4Q60688 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Foxd4Q60688 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Foxd4Q60688 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Foxd4Q60688 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Foxd4Q60688 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Foxd4Q60688 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Foxd4Q60688 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Foxd4Q60688 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Foxd4Q60688 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Foxd4Q60688 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Foxd4Q60688 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Foxd4Q60688 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Foxd4Q60688 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Foxd4Q60688 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Foxd4Q60688 Gm9719-201ENSMUST00000162765 543 ntBASIC13.93□□□□□ -0.18
Foxd4Q60688 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC13.93□□□□□ -0.18
Foxd4Q60688 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC13.93□□□□□ -0.18
Foxd4Q60688 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.93□□□□□ -0.18
Foxd4Q60688 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Foxd4Q60688 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.93□□□□□ -0.18
Foxd4Q60688 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Foxd4Q60688 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.93□□□□□ -0.18
Foxd4Q60688 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Foxd4Q60688 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Foxd4Q60688 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Foxd4Q60688 BC001981-202ENSMUST00000191393 1545 ntBASIC13.93□□□□□ -0.18
Foxd4Q60688 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Foxd4Q60688 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Foxd4Q60688 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Foxd4Q60688 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms