Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nr1h4Q60641 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nr1h4Q60641 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.73□□□□□ -0.37
Nr1h4Q60641 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nr1h4Q60641 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Nr1h4Q60641 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Nr1h4Q60641 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nr1h4Q60641 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Nr1h4Q60641 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nr1h4Q60641 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Nr1h4Q60641 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Nr1h4Q60641 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nr1h4Q60641 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nr1h4Q60641 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Nr1h4Q60641 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nr1h4Q60641 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nr1h4Q60641 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nr1h4Q60641 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Nr1h4Q60641 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nr1h4Q60641 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Nr1h4Q60641 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nr1h4Q60641 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nr1h4Q60641 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Nr1h4Q60641 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nr1h4Q60641 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.72□□□□□ -0.37
Nr1h4Q60641 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.72□□□□□ -0.37
Nr1h4Q60641 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Nr1h4Q60641 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nr1h4Q60641 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nr1h4Q60641 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nr1h4Q60641 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Nr1h4Q60641 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nr1h4Q60641 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nr1h4Q60641 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nr1h4Q60641 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nr1h4Q60641 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nr1h4Q60641 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nr1h4Q60641 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nr1h4Q60641 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nr1h4Q60641 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nr1h4Q60641 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.72□□□□□ -0.37
Nr1h4Q60641 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.72□□□□□ -0.37
Nr1h4Q60641 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nr1h4Q60641 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nr1h4Q60641 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Nr1h4Q60641 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nr1h4Q60641 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nr1h4Q60641 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nr1h4Q60641 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nr1h4Q60641 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nr1h4Q60641 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nr1h4Q60641 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nr1h4Q60641 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nr1h4Q60641 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nr1h4Q60641 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.71□□□□□ -0.37
Nr1h4Q60641 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Nr1h4Q60641 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Nr1h4Q60641 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nr1h4Q60641 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Nr1h4Q60641 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nr1h4Q60641 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Nr1h4Q60641 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
Nr1h4Q60641 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nr1h4Q60641 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nr1h4Q60641 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Nr1h4Q60641 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nr1h4Q60641 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.71□□□□□ -0.37
Nr1h4Q60641 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nr1h4Q60641 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Nr1h4Q60641 Gm12585-201ENSMUST00000117307 290 ntBASIC12.71□□□□□ -0.37
Nr1h4Q60641 Gm15693-201ENSMUST00000120470 637 ntBASIC12.71□□□□□ -0.37
Nr1h4Q60641 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nr1h4Q60641 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Nr1h4Q60641 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
Nr1h4Q60641 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.71□□□□□ -0.37
Nr1h4Q60641 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.71□□□□□ -0.37
Nr1h4Q60641 Shd-206ENSMUST00000225145 998 ntBASIC12.71□□□□□ -0.37
Nr1h4Q60641 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Nr1h4Q60641 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Nr1h4Q60641 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nr1h4Q60641 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nr1h4Q60641 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nr1h4Q60641 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.71□□□□□ -0.38
Nr1h4Q60641 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nr1h4Q60641 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Nr1h4Q60641 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Nr1h4Q60641 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Nr1h4Q60641 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nr1h4Q60641 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nr1h4Q60641 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nr1h4Q60641 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Nr1h4Q60641 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.7□□□□□ -0.38
Nr1h4Q60641 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Nr1h4Q60641 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nr1h4Q60641 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nr1h4Q60641 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.7□□□□□ -0.38
Nr1h4Q60641 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nr1h4Q60641 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Nr1h4Q60641 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nr1h4Q60641 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms