Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC11.47□□□□□ -0.57
Trav5d-4Q5R1F6 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Trav5d-4Q5R1F6 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav5d-4Q5R1F6 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC11.47□□□□□ -0.57
Trav5d-4Q5R1F6 Gm31326-201ENSMUST00000191856 1048 ntBASIC11.47□□□□□ -0.57
Trav5d-4Q5R1F6 Gm42612-201ENSMUST00000197986 623 ntBASIC11.47□□□□□ -0.57
Trav5d-4Q5R1F6 Gm43170-201ENSMUST00000199827 612 ntBASIC11.47□□□□□ -0.57
Trav5d-4Q5R1F6 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC11.47□□□□□ -0.57
Trav5d-4Q5R1F6 AC124732.1-201ENSMUST00000221551 910 ntBASIC11.47□□□□□ -0.57
Trav5d-4Q5R1F6 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav5d-4Q5R1F6 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC11.47□□□□□ -0.57
Trav5d-4Q5R1F6 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trav5d-4Q5R1F6 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav5d-4Q5R1F6 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav5d-4Q5R1F6 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav5d-4Q5R1F6 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav5d-4Q5R1F6 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav5d-4Q5R1F6 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav5d-4Q5R1F6 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.47□□□□□ -0.57
Trav5d-4Q5R1F6 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11.47□□□□□ -0.57
Trav5d-4Q5R1F6 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.47□□□□□ -0.57
Trav5d-4Q5R1F6 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trav5d-4Q5R1F6 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
Trav5d-4Q5R1F6 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav5d-4Q5R1F6 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav5d-4Q5R1F6 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav5d-4Q5R1F6 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.46□□□□□ -0.57
Trav5d-4Q5R1F6 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Trav5d-4Q5R1F6 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav5d-4Q5R1F6 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav5d-4Q5R1F6 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.46□□□□□ -0.57
Trav5d-4Q5R1F6 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav5d-4Q5R1F6 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav5d-4Q5R1F6 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav5d-4Q5R1F6 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav5d-4Q5R1F6 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav5d-4Q5R1F6 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav5d-4Q5R1F6 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.46□□□□□ -0.57
Trav5d-4Q5R1F6 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Trav5d-4Q5R1F6 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Trav5d-4Q5R1F6 Gm22189-201ENSMUST00000103822 86 ntBASIC11.46□□□□□ -0.57
Trav5d-4Q5R1F6 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav5d-4Q5R1F6 Gm13886-201ENSMUST00000117876 1183 ntBASIC11.46□□□□□ -0.57
Trav5d-4Q5R1F6 Gm12537-201ENSMUST00000119266 1002 ntBASIC11.46□□□□□ -0.57
Trav5d-4Q5R1F6 Gm12070-201ENSMUST00000119551 1002 ntBASIC11.46□□□□□ -0.57
Trav5d-4Q5R1F6 Gm12671-201ENSMUST00000119978 1002 ntBASIC11.46□□□□□ -0.57
Trav5d-4Q5R1F6 Gm13292-201ENSMUST00000120014 1000 ntBASIC11.46□□□□□ -0.57
Trav5d-4Q5R1F6 Gm12403-201ENSMUST00000121384 959 ntBASIC11.46□□□□□ -0.57
Trav5d-4Q5R1F6 Gm15376-201ENSMUST00000122258 783 ntBASIC11.46□□□□□ -0.57
Trav5d-4Q5R1F6 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC11.46□□□□□ -0.57
Trav5d-4Q5R1F6 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC11.46□□□□□ -0.57
Trav5d-4Q5R1F6 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC11.46□□□□□ -0.57
Trav5d-4Q5R1F6 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC11.46□□□□□ -0.57
Trav5d-4Q5R1F6 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav5d-4Q5R1F6 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC11.46□□□□□ -0.57
Trav5d-4Q5R1F6 Gm10359-201ENSMUST00000180167 1002 ntBASIC11.46□□□□□ -0.57
Trav5d-4Q5R1F6 Gm12033-201ENSMUST00000180654 1002 ntBASIC11.46□□□□□ -0.57
Trav5d-4Q5R1F6 Gm5559-201ENSMUST00000180755 1002 ntBASIC11.46□□□□□ -0.57
Trav5d-4Q5R1F6 Gm4335-201ENSMUST00000182581 1004 ntBASIC11.46□□□□□ -0.57
Trav5d-4Q5R1F6 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Trav5d-4Q5R1F6 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Trav5d-4Q5R1F6 Gm7730-201ENSMUST00000212486 454 ntBASIC11.46□□□□□ -0.57
Trav5d-4Q5R1F6 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav5d-4Q5R1F6 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC11.46□□□□□ -0.57
Trav5d-4Q5R1F6 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav5d-4Q5R1F6 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav5d-4Q5R1F6 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav5d-4Q5R1F6 Gm5161-201ENSMUST00000075243 853 ntBASIC11.46□□□□□ -0.57
Trav5d-4Q5R1F6 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav5d-4Q5R1F6 Gm24447-201ENSMUST00000083977 338 ntBASIC11.46□□□□□ -0.57
Trav5d-4Q5R1F6 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav5d-4Q5R1F6 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
Trav5d-4Q5R1F6 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav5d-4Q5R1F6 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav5d-4Q5R1F6 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav5d-4Q5R1F6 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav5d-4Q5R1F6 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav5d-4Q5R1F6 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav5d-4Q5R1F6 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav5d-4Q5R1F6 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav5d-4Q5R1F6 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav5d-4Q5R1F6 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav5d-4Q5R1F6 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav5d-4Q5R1F6 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11.46□□□□□ -0.58
Trav5d-4Q5R1F6 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Trav5d-4Q5R1F6 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav5d-4Q5R1F6 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav5d-4Q5R1F6 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav5d-4Q5R1F6 Gm43423-201ENSMUST00000198390 2094 ntBASIC11.45□□□□□ -0.58
Trav5d-4Q5R1F6 Gm3365-201ENSMUST00000216296 1480 ntBASIC11.45□□□□□ -0.58
Trav5d-4Q5R1F6 Ldb3-207ENSMUST00000227819 1499 ntBASIC11.45□□□□□ -0.58
Trav5d-4Q5R1F6 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav5d-4Q5R1F6 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav5d-4Q5R1F6 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav5d-4Q5R1F6 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav5d-4Q5R1F6 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trav5d-4Q5R1F6 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav5d-4Q5R1F6 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav5d-4Q5R1F6 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav5d-4Q5R1F6 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms