Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Scn2bQ56A07 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn2bQ56A07 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn2bQ56A07 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Scn2bQ56A07 Syt7-204ENSMUST00000223586 1344 ntBASIC13.19□□□□□ -0.3
Scn2bQ56A07 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.19□□□□□ -0.3
Scn2bQ56A07 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn2bQ56A07 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Scn2bQ56A07 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn2bQ56A07 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Scn2bQ56A07 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn2bQ56A07 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Scn2bQ56A07 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.19□□□□□ -0.3
Scn2bQ56A07 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn2bQ56A07 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.19□□□□□ -0.3
Scn2bQ56A07 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn2bQ56A07 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.19□□□□□ -0.3
Scn2bQ56A07 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.19□□□□□ -0.3
Scn2bQ56A07 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn2bQ56A07 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn2bQ56A07 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn2bQ56A07 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn2bQ56A07 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn2bQ56A07 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn2bQ56A07 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.19□□□□□ -0.3
Scn2bQ56A07 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Scn2bQ56A07 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Scn2bQ56A07 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Scn2bQ56A07 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Scn2bQ56A07 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn2bQ56A07 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.18□□□□□ -0.3
Scn2bQ56A07 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn2bQ56A07 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn2bQ56A07 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn2bQ56A07 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn2bQ56A07 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Scn2bQ56A07 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.18□□□□□ -0.3
Scn2bQ56A07 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn2bQ56A07 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn2bQ56A07 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn2bQ56A07 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn2bQ56A07 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Scn2bQ56A07 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.18□□□□□ -0.3
Scn2bQ56A07 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.18□□□□□ -0.3
Scn2bQ56A07 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Scn2bQ56A07 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Scn2bQ56A07 Gm16215-201ENSMUST00000161990 637 ntBASIC13.18□□□□□ -0.3
Scn2bQ56A07 Gm27437-201ENSMUST00000183429 107 ntBASIC13.18□□□□□ -0.3
Scn2bQ56A07 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.18□□□□□ -0.3
Scn2bQ56A07 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.18□□□□□ -0.3
Scn2bQ56A07 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn2bQ56A07 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn2bQ56A07 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn2bQ56A07 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn2bQ56A07 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Scn2bQ56A07 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Scn2bQ56A07 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.18□□□□□ -0.3
Scn2bQ56A07 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn2bQ56A07 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.18□□□□□ -0.3
Scn2bQ56A07 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn2bQ56A07 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Scn2bQ56A07 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn2bQ56A07 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn2bQ56A07 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.18□□□□□ -0.3
Scn2bQ56A07 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn2bQ56A07 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Scn2bQ56A07 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.18□□□□□ -0.3
Scn2bQ56A07 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn2bQ56A07 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.18□□□□□ -0.3
Scn2bQ56A07 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn2bQ56A07 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn2bQ56A07 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Scn2bQ56A07 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Scn2bQ56A07 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn2bQ56A07 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn2bQ56A07 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Scn2bQ56A07 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn2bQ56A07 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Scn2bQ56A07 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn2bQ56A07 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn2bQ56A07 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Scn2bQ56A07 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Scn2bQ56A07 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.17□□□□□ -0.3
Scn2bQ56A07 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.17□□□□□ -0.3
Scn2bQ56A07 Gm5866-201ENSMUST00000177881 973 ntBASIC13.17□□□□□ -0.3
Scn2bQ56A07 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Scn2bQ56A07 Gm9522-201ENSMUST00000182394 926 ntBASIC13.17□□□□□ -0.3
Scn2bQ56A07 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Scn2bQ56A07 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Scn2bQ56A07 Gm7730-201ENSMUST00000212486 454 ntBASIC13.17□□□□□ -0.3
Scn2bQ56A07 Gm5425-201ENSMUST00000214125 459 ntBASIC13.17□□□□□ -0.3
Scn2bQ56A07 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.17□□□□□ -0.3
Scn2bQ56A07 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn2bQ56A07 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.17□□□□□ -0.3
Scn2bQ56A07 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn2bQ56A07 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn2bQ56A07 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn2bQ56A07 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Scn2bQ56A07 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn2bQ56A07 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms