Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdkl5Q3UTQ8 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cdkl5Q3UTQ8 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
Cdkl5Q3UTQ8 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdkl5Q3UTQ8 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cdkl5Q3UTQ8 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Cdkl5Q3UTQ8 AC238940.1-201ENSMUST00000225106 1858 ntBASIC15.44■□□□□ 0.06
Cdkl5Q3UTQ8 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cdkl5Q3UTQ8 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cdkl5Q3UTQ8 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC15.44■□□□□ 0.06
Cdkl5Q3UTQ8 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cdkl5Q3UTQ8 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cdkl5Q3UTQ8 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Cdkl5Q3UTQ8 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Cdkl5Q3UTQ8 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cdkl5Q3UTQ8 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC15.44■□□□□ 0.06
Cdkl5Q3UTQ8 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC15.44■□□□□ 0.06
Cdkl5Q3UTQ8 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC15.44■□□□□ 0.06
Cdkl5Q3UTQ8 Gm44397-201ENSMUST00000195950 113 ntBASIC15.44■□□□□ 0.06
Cdkl5Q3UTQ8 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC15.44■□□□□ 0.06
Cdkl5Q3UTQ8 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cdkl5Q3UTQ8 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC15.44■□□□□ 0.06
Cdkl5Q3UTQ8 CT025535.1-201ENSMUST00000227172 491 ntBASIC15.44■□□□□ 0.06
Cdkl5Q3UTQ8 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cdkl5Q3UTQ8 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Cdkl5Q3UTQ8 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cdkl5Q3UTQ8 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cdkl5Q3UTQ8 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC15.44■□□□□ 0.06
Cdkl5Q3UTQ8 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cdkl5Q3UTQ8 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cdkl5Q3UTQ8 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Cdkl5Q3UTQ8 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cdkl5Q3UTQ8 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC15.44■□□□□ 0.06
Cdkl5Q3UTQ8 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cdkl5Q3UTQ8 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cdkl5Q3UTQ8 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cdkl5Q3UTQ8 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Cdkl5Q3UTQ8 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Cdkl5Q3UTQ8 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Cdkl5Q3UTQ8 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Cdkl5Q3UTQ8 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cdkl5Q3UTQ8 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cdkl5Q3UTQ8 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cdkl5Q3UTQ8 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cdkl5Q3UTQ8 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC15.43■□□□□ 0.06
Cdkl5Q3UTQ8 Gm15459-201ENSMUST00000117405 1941 ntBASIC15.43■□□□□ 0.06
Cdkl5Q3UTQ8 Gm8355-201ENSMUST00000177767 1941 ntBASIC15.43■□□□□ 0.06
Cdkl5Q3UTQ8 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC15.43■□□□□ 0.06
Cdkl5Q3UTQ8 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cdkl5Q3UTQ8 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Cdkl5Q3UTQ8 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC15.43■□□□□ 0.06
Cdkl5Q3UTQ8 Gm11400-201ENSMUST00000120853 1214 ntBASIC15.43■□□□□ 0.06
Cdkl5Q3UTQ8 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC15.43■□□□□ 0.06
Cdkl5Q3UTQ8 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Cdkl5Q3UTQ8 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC15.43■□□□□ 0.06
Cdkl5Q3UTQ8 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC15.43■□□□□ 0.06
Cdkl5Q3UTQ8 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Cdkl5Q3UTQ8 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
Cdkl5Q3UTQ8 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cdkl5Q3UTQ8 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cdkl5Q3UTQ8 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Cdkl5Q3UTQ8 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cdkl5Q3UTQ8 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cdkl5Q3UTQ8 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cdkl5Q3UTQ8 Gm44891-201ENSMUST00000208817 2223 ntBASIC15.43■□□□□ 0.06
Cdkl5Q3UTQ8 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC15.43■□□□□ 0.06
Cdkl5Q3UTQ8 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Cdkl5Q3UTQ8 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Cdkl5Q3UTQ8 AC096628.2-201ENSMUST00000225443 1413 ntBASIC15.43■□□□□ 0.06
Cdkl5Q3UTQ8 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cdkl5Q3UTQ8 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdkl5Q3UTQ8 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC15.42■□□□□ 0.06
Cdkl5Q3UTQ8 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC15.42■□□□□ 0.06
Cdkl5Q3UTQ8 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdkl5Q3UTQ8 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdkl5Q3UTQ8 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
Cdkl5Q3UTQ8 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC15.42■□□□□ 0.06
Cdkl5Q3UTQ8 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdkl5Q3UTQ8 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC15.42■□□□□ 0.06
Cdkl5Q3UTQ8 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC15.42■□□□□ 0.06
Cdkl5Q3UTQ8 Gm6473-201ENSMUST00000188572 1210 ntBASIC15.42■□□□□ 0.06
Cdkl5Q3UTQ8 Gm45668-201ENSMUST00000211271 493 ntBASIC15.42■□□□□ 0.06
Cdkl5Q3UTQ8 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdkl5Q3UTQ8 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC15.42■□□□□ 0.06
Cdkl5Q3UTQ8 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdkl5Q3UTQ8 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdkl5Q3UTQ8 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdkl5Q3UTQ8 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdkl5Q3UTQ8 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdkl5Q3UTQ8 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cdkl5Q3UTQ8 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdkl5Q3UTQ8 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdkl5Q3UTQ8 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdkl5Q3UTQ8 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cdkl5Q3UTQ8 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Cdkl5Q3UTQ8 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Cdkl5Q3UTQ8 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cdkl5Q3UTQ8 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdkl5Q3UTQ8 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdkl5Q3UTQ8 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms