Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim43aQ3TL54 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim43aQ3TL54 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trim43aQ3TL54 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim43aQ3TL54 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim43aQ3TL54 Gm42748-201ENSMUST00000199354 2341 ntBASIC14.15□□□□□ -0.14
Trim43aQ3TL54 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trim43aQ3TL54 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim43aQ3TL54 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim43aQ3TL54 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim43aQ3TL54 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim43aQ3TL54 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim43aQ3TL54 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim43aQ3TL54 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim43aQ3TL54 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim43aQ3TL54 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim43aQ3TL54 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim43aQ3TL54 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim43aQ3TL54 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim43aQ3TL54 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim43aQ3TL54 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim43aQ3TL54 Gm15653-201ENSMUST00000119247 907 ntBASIC14.15□□□□□ -0.14
Trim43aQ3TL54 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim43aQ3TL54 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.15□□□□□ -0.14
Trim43aQ3TL54 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim43aQ3TL54 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim43aQ3TL54 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.15□□□□□ -0.14
Trim43aQ3TL54 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim43aQ3TL54 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim43aQ3TL54 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim43aQ3TL54 Gm42480-201ENSMUST00000198434 2595 ntBASIC14.15□□□□□ -0.14
Trim43aQ3TL54 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Trim43aQ3TL54 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trim43aQ3TL54 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43aQ3TL54 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43aQ3TL54 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.14□□□□□ -0.15
Trim43aQ3TL54 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43aQ3TL54 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC14.14□□□□□ -0.15
Trim43aQ3TL54 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trim43aQ3TL54 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43aQ3TL54 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43aQ3TL54 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43aQ3TL54 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43aQ3TL54 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43aQ3TL54 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trim43aQ3TL54 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43aQ3TL54 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.14□□□□□ -0.15
Trim43aQ3TL54 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43aQ3TL54 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trim43aQ3TL54 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.14□□□□□ -0.15
Trim43aQ3TL54 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43aQ3TL54 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43aQ3TL54 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC14.14□□□□□ -0.15
Trim43aQ3TL54 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trim43aQ3TL54 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43aQ3TL54 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43aQ3TL54 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43aQ3TL54 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43aQ3TL54 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43aQ3TL54 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43aQ3TL54 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43aQ3TL54 Gm17435-202ENSMUST00000212699 1998 ntBASIC14.14□□□□□ -0.15
Trim43aQ3TL54 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trim43aQ3TL54 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.14□□□□□ -0.15
Trim43aQ3TL54 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43aQ3TL54 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43aQ3TL54 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim43aQ3TL54 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim43aQ3TL54 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim43aQ3TL54 Rnf17-202ENSMUST00000223627 2077 ntBASIC14.13□□□□□ -0.15
Trim43aQ3TL54 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trim43aQ3TL54 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC14.13□□□□□ -0.15
Trim43aQ3TL54 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim43aQ3TL54 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim43aQ3TL54 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trim43aQ3TL54 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
Trim43aQ3TL54 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim43aQ3TL54 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim43aQ3TL54 Gm8410-201ENSMUST00000117225 605 ntBASIC14.13□□□□□ -0.15
Trim43aQ3TL54 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Trim43aQ3TL54 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.13□□□□□ -0.15
Trim43aQ3TL54 Gm27622-201ENSMUST00000183779 60 ntBASIC14.13□□□□□ -0.15
Trim43aQ3TL54 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Trim43aQ3TL54 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Trim43aQ3TL54 Gm10766-202ENSMUST00000194123 606 ntBASIC14.13□□□□□ -0.15
Trim43aQ3TL54 Gm9229-201ENSMUST00000222777 126 ntBASIC14.13□□□□□ -0.15
Trim43aQ3TL54 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Trim43aQ3TL54 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim43aQ3TL54 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim43aQ3TL54 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim43aQ3TL54 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim43aQ3TL54 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim43aQ3TL54 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim43aQ3TL54 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim43aQ3TL54 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim43aQ3TL54 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim43aQ3TL54 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43aQ3TL54 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43aQ3TL54 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43aQ3TL54 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms