Protein–RNA interactions for Protein: Q3LRV9

Treml4, Trem-like transcript 4 protein, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml4Q3LRV9 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.54□□□□□ -0.4
Treml4Q3LRV9 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Treml4Q3LRV9 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Treml4Q3LRV9 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Treml4Q3LRV9 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Treml4Q3LRV9 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Treml4Q3LRV9 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Treml4Q3LRV9 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Treml4Q3LRV9 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Treml4Q3LRV9 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Treml4Q3LRV9 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Treml4Q3LRV9 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Treml4Q3LRV9 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.54□□□□□ -0.4
Treml4Q3LRV9 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Treml4Q3LRV9 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Treml4Q3LRV9 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Treml4Q3LRV9 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.54□□□□□ -0.4
Treml4Q3LRV9 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Treml4Q3LRV9 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.54□□□□□ -0.4
Treml4Q3LRV9 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.54□□□□□ -0.4
Treml4Q3LRV9 Gm12203-201ENSMUST00000118235 598 ntBASIC12.54□□□□□ -0.4
Treml4Q3LRV9 Gm12209-201ENSMUST00000120089 596 ntBASIC12.54□□□□□ -0.4
Treml4Q3LRV9 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Treml4Q3LRV9 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.54□□□□□ -0.4
Treml4Q3LRV9 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.54□□□□□ -0.4
Treml4Q3LRV9 Mir8109-201ENSMUST00000184375 117 ntBASIC12.54□□□□□ -0.4
Treml4Q3LRV9 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.54□□□□□ -0.4
Treml4Q3LRV9 Gm38241-201ENSMUST00000192641 898 ntBASIC12.54□□□□□ -0.4
Treml4Q3LRV9 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.54□□□□□ -0.4
Treml4Q3LRV9 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Treml4Q3LRV9 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.54□□□□□ -0.4
Treml4Q3LRV9 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Treml4Q3LRV9 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Treml4Q3LRV9 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Treml4Q3LRV9 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Treml4Q3LRV9 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Treml4Q3LRV9 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Treml4Q3LRV9 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Treml4Q3LRV9 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Treml4Q3LRV9 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Treml4Q3LRV9 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Treml4Q3LRV9 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Treml4Q3LRV9 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Treml4Q3LRV9 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Treml4Q3LRV9 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Treml4Q3LRV9 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Treml4Q3LRV9 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Treml4Q3LRV9 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Treml4Q3LRV9 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Treml4Q3LRV9 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Treml4Q3LRV9 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Treml4Q3LRV9 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Treml4Q3LRV9 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Treml4Q3LRV9 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Treml4Q3LRV9 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Treml4Q3LRV9 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Treml4Q3LRV9 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Treml4Q3LRV9 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Treml4Q3LRV9 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Treml4Q3LRV9 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Treml4Q3LRV9 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.53□□□□□ -0.4
Treml4Q3LRV9 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.53□□□□□ -0.4
Treml4Q3LRV9 Gm7584-201ENSMUST00000175829 940 ntBASIC12.53□□□□□ -0.4
Treml4Q3LRV9 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Treml4Q3LRV9 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Treml4Q3LRV9 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Treml4Q3LRV9 Gm9823-201ENSMUST00000051212 327 ntBASIC12.53□□□□□ -0.4
Treml4Q3LRV9 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Treml4Q3LRV9 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Treml4Q3LRV9 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Treml4Q3LRV9 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Treml4Q3LRV9 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Treml4Q3LRV9 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Treml4Q3LRV9 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Treml4Q3LRV9 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.53□□□□□ -0.4
Treml4Q3LRV9 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Treml4Q3LRV9 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Treml4Q3LRV9 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Treml4Q3LRV9 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Treml4Q3LRV9 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Treml4Q3LRV9 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Treml4Q3LRV9 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Treml4Q3LRV9 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Treml4Q3LRV9 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.52□□□□□ -0.4
Treml4Q3LRV9 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Treml4Q3LRV9 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Treml4Q3LRV9 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Treml4Q3LRV9 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.52□□□□□ -0.4
Treml4Q3LRV9 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Treml4Q3LRV9 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Treml4Q3LRV9 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Treml4Q3LRV9 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
Treml4Q3LRV9 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Treml4Q3LRV9 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Treml4Q3LRV9 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Treml4Q3LRV9 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Treml4Q3LRV9 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Treml4Q3LRV9 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Treml4Q3LRV9 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Treml4Q3LRV9 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms