Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Ptchd3Q0EEE2 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ptchd3Q0EEE2 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ptchd3Q0EEE2 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.88□□□□□ -0.35
Ptchd3Q0EEE2 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.88□□□□□ -0.35
Ptchd3Q0EEE2 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Ptchd3Q0EEE2 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ptchd3Q0EEE2 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ptchd3Q0EEE2 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ptchd3Q0EEE2 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ptchd3Q0EEE2 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ptchd3Q0EEE2 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ptchd3Q0EEE2 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Ptchd3Q0EEE2 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ptchd3Q0EEE2 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ptchd3Q0EEE2 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ptchd3Q0EEE2 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ptchd3Q0EEE2 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ptchd3Q0EEE2 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.88□□□□□ -0.35
Ptchd3Q0EEE2 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ptchd3Q0EEE2 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ptchd3Q0EEE2 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ptchd3Q0EEE2 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Ptchd3Q0EEE2 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ptchd3Q0EEE2 Mir497b-201ENSMUST00000093601 125 ntBASIC12.88□□□□□ -0.35
Ptchd3Q0EEE2 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Ptchd3Q0EEE2 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ptchd3Q0EEE2 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.88□□□□□ -0.35
Ptchd3Q0EEE2 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ptchd3Q0EEE2 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ptchd3Q0EEE2 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ptchd3Q0EEE2 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ptchd3Q0EEE2 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ptchd3Q0EEE2 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ptchd3Q0EEE2 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Ptchd3Q0EEE2 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ptchd3Q0EEE2 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ptchd3Q0EEE2 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ptchd3Q0EEE2 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Ptchd3Q0EEE2 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ptchd3Q0EEE2 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ptchd3Q0EEE2 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ptchd3Q0EEE2 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.87□□□□□ -0.35
Ptchd3Q0EEE2 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ptchd3Q0EEE2 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ptchd3Q0EEE2 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ptchd3Q0EEE2 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ptchd3Q0EEE2 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.87□□□□□ -0.35
Ptchd3Q0EEE2 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.87□□□□□ -0.35
Ptchd3Q0EEE2 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.87□□□□□ -0.35
Ptchd3Q0EEE2 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.87□□□□□ -0.35
Ptchd3Q0EEE2 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.87□□□□□ -0.35
Ptchd3Q0EEE2 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ptchd3Q0EEE2 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Ptchd3Q0EEE2 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Ptchd3Q0EEE2 Gm17837-201ENSMUST00000186435 985 ntBASIC12.87□□□□□ -0.35
Ptchd3Q0EEE2 Gm37714-201ENSMUST00000194742 342 ntBASIC12.87□□□□□ -0.35
Ptchd3Q0EEE2 Gm46209-201ENSMUST00000217912 553 ntBASIC12.87□□□□□ -0.35
Ptchd3Q0EEE2 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.87□□□□□ -0.35
Ptchd3Q0EEE2 Gm6888-201ENSMUST00000221983 706 ntBASIC12.87□□□□□ -0.35
Ptchd3Q0EEE2 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.87□□□□□ -0.35
Ptchd3Q0EEE2 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ptchd3Q0EEE2 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ptchd3Q0EEE2 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Ptchd3Q0EEE2 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC12.87□□□□□ -0.35
Ptchd3Q0EEE2 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ptchd3Q0EEE2 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ptchd3Q0EEE2 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ptchd3Q0EEE2 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ptchd3Q0EEE2 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Ptchd3Q0EEE2 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ptchd3Q0EEE2 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.87□□□□□ -0.35
Ptchd3Q0EEE2 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ptchd3Q0EEE2 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ptchd3Q0EEE2 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ptchd3Q0EEE2 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ptchd3Q0EEE2 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.87□□□□□ -0.35
Ptchd3Q0EEE2 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ptchd3Q0EEE2 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ptchd3Q0EEE2 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.86□□□□□ -0.35
Ptchd3Q0EEE2 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ptchd3Q0EEE2 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ptchd3Q0EEE2 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ptchd3Q0EEE2 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.86□□□□□ -0.35
Ptchd3Q0EEE2 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ptchd3Q0EEE2 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ptchd3Q0EEE2 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ptchd3Q0EEE2 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ptchd3Q0EEE2 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ptchd3Q0EEE2 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ptchd3Q0EEE2 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ptchd3Q0EEE2 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ptchd3Q0EEE2 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ptchd3Q0EEE2 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ptchd3Q0EEE2 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ptchd3Q0EEE2 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Ptchd3Q0EEE2 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ptchd3Q0EEE2 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ptchd3Q0EEE2 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ptchd3Q0EEE2 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms