Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Chd8Q09XV5 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chd8Q09XV5 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Chd8Q09XV5 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chd8Q09XV5 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Chd8Q09XV5 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chd8Q09XV5 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chd8Q09XV5 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Chd8Q09XV5 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Chd8Q09XV5 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Chd8Q09XV5 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC11.81□□□□□ -0.52
Chd8Q09XV5 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chd8Q09XV5 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chd8Q09XV5 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Chd8Q09XV5 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chd8Q09XV5 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chd8Q09XV5 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chd8Q09XV5 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chd8Q09XV5 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chd8Q09XV5 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Chd8Q09XV5 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chd8Q09XV5 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chd8Q09XV5 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Chd8Q09XV5 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chd8Q09XV5 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chd8Q09XV5 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chd8Q09XV5 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Chd8Q09XV5 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chd8Q09XV5 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chd8Q09XV5 Gm43072-201ENSMUST00000200283 1671 ntBASIC11.8□□□□□ -0.52
Chd8Q09XV5 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chd8Q09XV5 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chd8Q09XV5 Gm14717-201ENSMUST00000140450 649 ntTSL 3 BASIC11.8□□□□□ -0.52
Chd8Q09XV5 Gm22121-201ENSMUST00000175148 54 ntBASIC11.8□□□□□ -0.52
Chd8Q09XV5 Gm27910-201ENSMUST00000185004 107 ntBASIC11.8□□□□□ -0.52
Chd8Q09XV5 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC11.8□□□□□ -0.52
Chd8Q09XV5 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chd8Q09XV5 Gm4930-201ENSMUST00000219926 1087 ntBASIC11.8□□□□□ -0.52
Chd8Q09XV5 AC154436.1-201ENSMUST00000227272 782 ntBASIC11.8□□□□□ -0.52
Chd8Q09XV5 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chd8Q09XV5 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chd8Q09XV5 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chd8Q09XV5 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chd8Q09XV5 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chd8Q09XV5 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC11.8□□□□□ -0.52
Chd8Q09XV5 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Chd8Q09XV5 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chd8Q09XV5 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC11.8□□□□□ -0.52
Chd8Q09XV5 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chd8Q09XV5 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chd8Q09XV5 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chd8Q09XV5 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chd8Q09XV5 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC11.8□□□□□ -0.52
Chd8Q09XV5 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chd8Q09XV5 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC11.8□□□□□ -0.52
Chd8Q09XV5 Gm13700-201ENSMUST00000118624 1128 ntBASIC11.8□□□□□ -0.52
Chd8Q09XV5 Gm6963-201ENSMUST00000147879 379 ntBASIC11.8□□□□□ -0.52
Chd8Q09XV5 Gm6397-201ENSMUST00000161973 1069 ntBASIC11.8□□□□□ -0.52
Chd8Q09XV5 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Chd8Q09XV5 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.8□□□□□ -0.52
Chd8Q09XV5 2810049E08Rik-201ENSMUST00000185600 1102 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chd8Q09XV5 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.8□□□□□ -0.52
Chd8Q09XV5 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC11.8□□□□□ -0.52
Chd8Q09XV5 AC166341.2-201ENSMUST00000220571 120 ntBASIC11.8□□□□□ -0.52
Chd8Q09XV5 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chd8Q09XV5 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chd8Q09XV5 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chd8Q09XV5 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.8□□□□□ -0.52
Chd8Q09XV5 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chd8Q09XV5 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chd8Q09XV5 Mmp14-206ENSMUST00000225641 3238 ntBASIC11.8□□□□□ -0.52
Chd8Q09XV5 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chd8Q09XV5 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chd8Q09XV5 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chd8Q09XV5 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chd8Q09XV5 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC11.8□□□□□ -0.52
Chd8Q09XV5 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chd8Q09XV5 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC11.8□□□□□ -0.52
Chd8Q09XV5 Gm6741-201ENSMUST00000057074 1330 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Chd8Q09XV5 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chd8Q09XV5 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chd8Q09XV5 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chd8Q09XV5 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Chd8Q09XV5 AC174678.1-201ENSMUST00000228007 2749 ntBASIC11.79□□□□□ -0.52
Chd8Q09XV5 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chd8Q09XV5 Gm15003-201ENSMUST00000118884 446 ntBASIC11.79□□□□□ -0.52
Chd8Q09XV5 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC11.79□□□□□ -0.52
Chd8Q09XV5 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Chd8Q09XV5 Gm26368-201ENSMUST00000157826 118 ntBASIC11.79□□□□□ -0.52
Chd8Q09XV5 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC11.79□□□□□ -0.52
Chd8Q09XV5 Gm11942-201ENSMUST00000180255 345 ntBASIC11.79□□□□□ -0.52
Chd8Q09XV5 CT030653.1-201ENSMUST00000224382 1279 ntBASIC11.79□□□□□ -0.52
Chd8Q09XV5 Lgi3-203ENSMUST00000226548 1001 ntBASIC11.79□□□□□ -0.52
Chd8Q09XV5 AC121357.1-201ENSMUST00000227365 608 ntBASIC11.79□□□□□ -0.52
Chd8Q09XV5 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chd8Q09XV5 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chd8Q09XV5 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chd8Q09XV5 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chd8Q09XV5 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Chd8Q09XV5 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms