Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.77□□□□□ -0.37
Hoxc4Q08624 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Hoxc4Q08624 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxc4Q08624 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxc4Q08624 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxc4Q08624 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxc4Q08624 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Hoxc4Q08624 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxc4Q08624 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Hoxc4Q08624 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxc4Q08624 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxc4Q08624 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.76□□□□□ -0.37
Hoxc4Q08624 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxc4Q08624 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxc4Q08624 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxc4Q08624 Gm15198-201ENSMUST00000117283 177 ntBASIC12.76□□□□□ -0.37
Hoxc4Q08624 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.76□□□□□ -0.37
Hoxc4Q08624 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxc4Q08624 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxc4Q08624 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxc4Q08624 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.76□□□□□ -0.37
Hoxc4Q08624 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxc4Q08624 Gm43133-201ENSMUST00000197472 463 ntBASIC12.76□□□□□ -0.37
Hoxc4Q08624 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.76□□□□□ -0.37
Hoxc4Q08624 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxc4Q08624 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.76□□□□□ -0.37
Hoxc4Q08624 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Hoxc4Q08624 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxc4Q08624 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.76□□□□□ -0.37
Hoxc4Q08624 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxc4Q08624 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.76□□□□□ -0.37
Hoxc4Q08624 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxc4Q08624 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxc4Q08624 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxc4Q08624 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxc4Q08624 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.76□□□□□ -0.37
Hoxc4Q08624 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxc4Q08624 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
Hoxc4Q08624 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxc4Q08624 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.76□□□□□ -0.37
Hoxc4Q08624 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxc4Q08624 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxc4Q08624 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxc4Q08624 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Hoxc4Q08624 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.76□□□□□ -0.37
Hoxc4Q08624 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxc4Q08624 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Hoxc4Q08624 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxc4Q08624 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxc4Q08624 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxc4Q08624 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Hoxc4Q08624 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Hoxc4Q08624 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxc4Q08624 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.75□□□□□ -0.37
Hoxc4Q08624 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Hoxc4Q08624 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.75□□□□□ -0.37
Hoxc4Q08624 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxc4Q08624 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Hoxc4Q08624 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.75□□□□□ -0.37
Hoxc4Q08624 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxc4Q08624 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxc4Q08624 Gm17208-201ENSMUST00000168388 535 ntBASIC12.75□□□□□ -0.37
Hoxc4Q08624 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.75□□□□□ -0.37
Hoxc4Q08624 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.75□□□□□ -0.37
Hoxc4Q08624 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.75□□□□□ -0.37
Hoxc4Q08624 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Hoxc4Q08624 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxc4Q08624 Gm6222-202ENSMUST00000182143 629 ntBASIC12.75□□□□□ -0.37
Hoxc4Q08624 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.75□□□□□ -0.37
Hoxc4Q08624 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxc4Q08624 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.75□□□□□ -0.37
Hoxc4Q08624 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.75□□□□□ -0.37
Hoxc4Q08624 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxc4Q08624 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxc4Q08624 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxc4Q08624 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Hoxc4Q08624 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxc4Q08624 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxc4Q08624 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxc4Q08624 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.75□□□□□ -0.37
Hoxc4Q08624 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Hoxc4Q08624 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxc4Q08624 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxc4Q08624 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxc4Q08624 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxc4Q08624 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Hoxc4Q08624 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxc4Q08624 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.74□□□□□ -0.37
Hoxc4Q08624 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxc4Q08624 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxc4Q08624 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxc4Q08624 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Hoxc4Q08624 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Hoxc4Q08624 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxc4Q08624 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxc4Q08624 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxc4Q08624 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.74□□□□□ -0.37
Hoxc4Q08624 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxc4Q08624 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxc4Q08624 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms