Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ebf1Q07802 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ebf1Q07802 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ebf1Q07802 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.51□□□□□ -0.25
Ebf1Q07802 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ebf1Q07802 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
Ebf1Q07802 Gm12203-201ENSMUST00000118235 598 ntBASIC13.51□□□□□ -0.25
Ebf1Q07802 Gm12209-201ENSMUST00000120089 596 ntBASIC13.51□□□□□ -0.25
Ebf1Q07802 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ebf1Q07802 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC13.51□□□□□ -0.25
Ebf1Q07802 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ebf1Q07802 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ebf1Q07802 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Ebf1Q07802 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ebf1Q07802 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ebf1Q07802 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ebf1Q07802 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ebf1Q07802 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ebf1Q07802 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ebf1Q07802 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.51□□□□□ -0.25
Ebf1Q07802 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Ebf1Q07802 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ebf1Q07802 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ebf1Q07802 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Ebf1Q07802 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ebf1Q07802 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ebf1Q07802 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ebf1Q07802 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Ebf1Q07802 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ebf1Q07802 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ebf1Q07802 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ebf1Q07802 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Ebf1Q07802 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ebf1Q07802 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ebf1Q07802 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Ebf1Q07802 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ebf1Q07802 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.5□□□□□ -0.25
Ebf1Q07802 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Ebf1Q07802 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.5□□□□□ -0.25
Ebf1Q07802 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ebf1Q07802 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ebf1Q07802 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC13.5□□□□□ -0.25
Ebf1Q07802 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC13.5□□□□□ -0.25
Ebf1Q07802 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ebf1Q07802 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC13.5□□□□□ -0.25
Ebf1Q07802 Gm38144-201ENSMUST00000192790 465 ntBASIC13.5□□□□□ -0.25
Ebf1Q07802 Gm42627-201ENSMUST00000197347 224 ntBASIC13.5□□□□□ -0.25
Ebf1Q07802 Gm43822-201ENSMUST00000200285 476 ntBASIC13.5□□□□□ -0.25
Ebf1Q07802 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ebf1Q07802 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
Ebf1Q07802 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ebf1Q07802 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ebf1Q07802 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ebf1Q07802 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ebf1Q07802 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ebf1Q07802 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.5□□□□□ -0.25
Ebf1Q07802 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Ebf1Q07802 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.5□□□□□ -0.25
Ebf1Q07802 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ebf1Q07802 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ebf1Q07802 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ebf1Q07802 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Ebf1Q07802 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.5□□□□□ -0.25
Ebf1Q07802 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ebf1Q07802 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ebf1Q07802 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ebf1Q07802 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Ebf1Q07802 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Ebf1Q07802 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.5□□□□□ -0.25
Ebf1Q07802 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ebf1Q07802 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ebf1Q07802 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf1Q07802 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf1Q07802 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Ebf1Q07802 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf1Q07802 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.49□□□□□ -0.25
Ebf1Q07802 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Ebf1Q07802 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf1Q07802 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf1Q07802 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf1Q07802 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf1Q07802 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf1Q07802 Gm27501-201ENSMUST00000183599 107 ntBASIC13.49□□□□□ -0.25
Ebf1Q07802 Mir8109-201ENSMUST00000184375 117 ntBASIC13.49□□□□□ -0.25
Ebf1Q07802 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf1Q07802 Gm37008-201ENSMUST00000195712 319 ntBASIC13.49□□□□□ -0.25
Ebf1Q07802 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.49□□□□□ -0.25
Ebf1Q07802 Gm17330-201ENSMUST00000221047 165 ntBASIC13.49□□□□□ -0.25
Ebf1Q07802 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf1Q07802 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf1Q07802 Gm9823-201ENSMUST00000051212 327 ntBASIC13.49□□□□□ -0.25
Ebf1Q07802 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf1Q07802 Snora73a-201ENSMUST00000082453 205 ntBASIC13.49□□□□□ -0.25
Ebf1Q07802 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf1Q07802 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf1Q07802 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf1Q07802 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Ebf1Q07802 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf1Q07802 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf1Q07802 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms