Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox4Q06831 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox4Q06831 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox4Q06831 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox4Q06831 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox4Q06831 Matn2-206ENSMUST00000228570 2798 ntBASIC13.1□□□□□ -0.31
Sox4Q06831 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox4Q06831 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox4Q06831 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox4Q06831 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox4Q06831 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox4Q06831 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Sox4Q06831 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.1□□□□□ -0.31
Sox4Q06831 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sox4Q06831 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.1□□□□□ -0.31
Sox4Q06831 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.1□□□□□ -0.31
Sox4Q06831 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.1□□□□□ -0.31
Sox4Q06831 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.1□□□□□ -0.31
Sox4Q06831 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sox4Q06831 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC13.1□□□□□ -0.31
Sox4Q06831 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox4Q06831 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox4Q06831 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox4Q06831 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox4Q06831 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox4Q06831 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox4Q06831 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox4Q06831 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sox4Q06831 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox4Q06831 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox4Q06831 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sox4Q06831 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sox4Q06831 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.1□□□□□ -0.31
Sox4Q06831 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.1□□□□□ -0.31
Sox4Q06831 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC13.1□□□□□ -0.31
Sox4Q06831 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.1□□□□□ -0.31
Sox4Q06831 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox4Q06831 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox4Q06831 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox4Q06831 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sox4Q06831 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox4Q06831 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox4Q06831 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sox4Q06831 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox4Q06831 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox4Q06831 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Sox4Q06831 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Sox4Q06831 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC13.09□□□□□ -0.31
Sox4Q06831 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox4Q06831 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox4Q06831 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.09□□□□□ -0.31
Sox4Q06831 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.09□□□□□ -0.31
Sox4Q06831 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sox4Q06831 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
Sox4Q06831 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox4Q06831 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sox4Q06831 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Sox4Q06831 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sox4Q06831 Gm14350-201ENSMUST00000116642 640 ntBASIC13.09□□□□□ -0.31
Sox4Q06831 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sox4Q06831 Gm11814-201ENSMUST00000119515 929 ntBASIC13.09□□□□□ -0.31
Sox4Q06831 Gm11803-201ENSMUST00000119966 444 ntBASIC13.09□□□□□ -0.31
Sox4Q06831 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.09□□□□□ -0.31
Sox4Q06831 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.09□□□□□ -0.31
Sox4Q06831 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sox4Q06831 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Sox4Q06831 Gm17150-201ENSMUST00000165577 381 ntBASIC13.09□□□□□ -0.31
Sox4Q06831 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox4Q06831 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox4Q06831 Proscos-202ENSMUST00000178990 666 ntBASIC13.09□□□□□ -0.31
Sox4Q06831 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.09□□□□□ -0.31
Sox4Q06831 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sox4Q06831 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.09□□□□□ -0.31
Sox4Q06831 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.09□□□□□ -0.31
Sox4Q06831 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.09□□□□□ -0.31
Sox4Q06831 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.09□□□□□ -0.31
Sox4Q06831 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sox4Q06831 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Sox4Q06831 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC13.09□□□□□ -0.31
Sox4Q06831 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sox4Q06831 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.09□□□□□ -0.31
Sox4Q06831 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox4Q06831 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox4Q06831 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox4Q06831 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox4Q06831 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox4Q06831 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox4Q06831 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Sox4Q06831 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox4Q06831 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox4Q06831 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sox4Q06831 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sox4Q06831 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sox4Q06831 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sox4Q06831 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sox4Q06831 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox4Q06831 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.09□□□□□ -0.31
Sox4Q06831 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox4Q06831 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Sox4Q06831 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.08□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms