Protein–RNA interactions for Protein: Q04683

Cxcr5, C-X-C chemokine receptor type 5, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr5Q04683 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cxcr5Q04683 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cxcr5Q04683 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cxcr5Q04683 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Cxcr5Q04683 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cxcr5Q04683 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Cxcr5Q04683 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.69□□□□□ -0.38
Cxcr5Q04683 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cxcr5Q04683 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cxcr5Q04683 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cxcr5Q04683 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cxcr5Q04683 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cxcr5Q04683 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cxcr5Q04683 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cxcr5Q04683 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Cxcr5Q04683 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.69□□□□□ -0.38
Cxcr5Q04683 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cxcr5Q04683 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.69□□□□□ -0.38
Cxcr5Q04683 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cxcr5Q04683 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cxcr5Q04683 Gm25948-201ENSMUST00000175334 112 ntBASIC12.69□□□□□ -0.38
Cxcr5Q04683 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cxcr5Q04683 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC12.69□□□□□ -0.38
Cxcr5Q04683 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.69□□□□□ -0.38
Cxcr5Q04683 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cxcr5Q04683 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.69□□□□□ -0.38
Cxcr5Q04683 Gm6888-201ENSMUST00000221983 706 ntBASIC12.69□□□□□ -0.38
Cxcr5Q04683 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cxcr5Q04683 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cxcr5Q04683 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cxcr5Q04683 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Cxcr5Q04683 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cxcr5Q04683 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cxcr5Q04683 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Cxcr5Q04683 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cxcr5Q04683 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Cxcr5Q04683 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cxcr5Q04683 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Cxcr5Q04683 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cxcr5Q04683 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cxcr5Q04683 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cxcr5Q04683 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cxcr5Q04683 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.69□□□□□ -0.38
Cxcr5Q04683 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cxcr5Q04683 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Cxcr5Q04683 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cxcr5Q04683 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cxcr5Q04683 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Cxcr5Q04683 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cxcr5Q04683 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cxcr5Q04683 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cxcr5Q04683 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cxcr5Q04683 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Cxcr5Q04683 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cxcr5Q04683 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cxcr5Q04683 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cxcr5Q04683 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Cxcr5Q04683 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cxcr5Q04683 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cxcr5Q04683 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cxcr5Q04683 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.68□□□□□ -0.38
Cxcr5Q04683 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.68□□□□□ -0.38
Cxcr5Q04683 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cxcr5Q04683 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cxcr5Q04683 Gm27618-201ENSMUST00000183671 60 ntBASIC12.68□□□□□ -0.38
Cxcr5Q04683 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.68□□□□□ -0.38
Cxcr5Q04683 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC12.68□□□□□ -0.38
Cxcr5Q04683 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cxcr5Q04683 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.68□□□□□ -0.38
Cxcr5Q04683 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cxcr5Q04683 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cxcr5Q04683 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Cxcr5Q04683 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cxcr5Q04683 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cxcr5Q04683 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.68□□□□□ -0.38
Cxcr5Q04683 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.68□□□□□ -0.38
Cxcr5Q04683 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cxcr5Q04683 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cxcr5Q04683 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cxcr5Q04683 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Cxcr5Q04683 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Cxcr5Q04683 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cxcr5Q04683 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cxcr5Q04683 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cxcr5Q04683 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cxcr5Q04683 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Cxcr5Q04683 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cxcr5Q04683 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.68□□□□□ -0.38
Cxcr5Q04683 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.68□□□□□ -0.38
Cxcr5Q04683 Fgf17-202ENSMUST00000227123 1336 ntBASIC12.67□□□□□ -0.38
Cxcr5Q04683 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcr5Q04683 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcr5Q04683 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Cxcr5Q04683 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Cxcr5Q04683 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Cxcr5Q04683 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcr5Q04683 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Cxcr5Q04683 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcr5Q04683 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcr5Q04683 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms