Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx3-2P97503 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx3-2P97503 Gm12390-201ENSMUST00000117897 397 ntBASIC12.62□□□□□ -0.39
Nkx3-2P97503 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Nkx3-2P97503 AY702102-202ENSMUST00000194651 1173 ntBASIC12.62□□□□□ -0.39
Nkx3-2P97503 Gm7561-201ENSMUST00000211203 886 ntBASIC12.62□□□□□ -0.39
Nkx3-2P97503 Gm18041-201ENSMUST00000218210 618 ntBASIC12.62□□□□□ -0.39
Nkx3-2P97503 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Nkx3-2P97503 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx3-2P97503 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx3-2P97503 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Nkx3-2P97503 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Nkx3-2P97503 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx3-2P97503 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx3-2P97503 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx3-2P97503 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx3-2P97503 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Nkx3-2P97503 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Nkx3-2P97503 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx3-2P97503 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx3-2P97503 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx3-2P97503 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx3-2P97503 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx3-2P97503 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx3-2P97503 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Nkx3-2P97503 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx3-2P97503 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx3-2P97503 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx3-2P97503 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx3-2P97503 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx3-2P97503 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx3-2P97503 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx3-2P97503 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx3-2P97503 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.61□□□□□ -0.39
Nkx3-2P97503 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx3-2P97503 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx3-2P97503 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx3-2P97503 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx3-2P97503 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Nkx3-2P97503 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx3-2P97503 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx3-2P97503 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx3-2P97503 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx3-2P97503 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.61□□□□□ -0.39
Nkx3-2P97503 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Nkx3-2P97503 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx3-2P97503 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx3-2P97503 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.61□□□□□ -0.39
Nkx3-2P97503 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx3-2P97503 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx3-2P97503 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx3-2P97503 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx3-2P97503 Gm27839-201ENSMUST00000184242 106 ntBASIC12.61□□□□□ -0.39
Nkx3-2P97503 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Nkx3-2P97503 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx3-2P97503 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx3-2P97503 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx3-2P97503 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx3-2P97503 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx3-2P97503 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx3-2P97503 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx3-2P97503 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx3-2P97503 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Nkx3-2P97503 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx3-2P97503 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx3-2P97503 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Nkx3-2P97503 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Nkx3-2P97503 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.61□□□□□ -0.39
Nkx3-2P97503 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx3-2P97503 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.61□□□□□ -0.39
Nkx3-2P97503 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Nkx3-2P97503 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx3-2P97503 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx3-2P97503 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Nkx3-2P97503 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx3-2P97503 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx3-2P97503 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx3-2P97503 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx3-2P97503 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx3-2P97503 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx3-2P97503 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx3-2P97503 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx3-2P97503 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx3-2P97503 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.6□□□□□ -0.39
Nkx3-2P97503 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx3-2P97503 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.6□□□□□ -0.39
Nkx3-2P97503 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx3-2P97503 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx3-2P97503 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx3-2P97503 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.6□□□□□ -0.39
Nkx3-2P97503 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Nkx3-2P97503 Gm8652-201ENSMUST00000181363 964 ntBASIC12.6□□□□□ -0.39
Nkx3-2P97503 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx3-2P97503 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx3-2P97503 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Nkx3-2P97503 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Nkx3-2P97503 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Nkx3-2P97503 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx3-2P97503 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Nkx3-2P97503 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms