Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcc1P97496 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC16.62■□□□□ 0.25
Smarcc1P97496 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC16.62■□□□□ 0.25
Smarcc1P97496 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcc1P97496 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcc1P97496 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Smarcc1P97496 Gm9678-201ENSMUST00000198979 1149 ntBASIC16.62■□□□□ 0.25
Smarcc1P97496 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Smarcc1P97496 Gm19963-201ENSMUST00000208413 1255 ntBASIC16.62■□□□□ 0.25
Smarcc1P97496 Gm18212-201ENSMUST00000211678 889 ntBASIC16.62■□□□□ 0.25
Smarcc1P97496 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC16.62■□□□□ 0.25
Smarcc1P97496 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC16.62■□□□□ 0.25
Smarcc1P97496 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Smarcc1P97496 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcc1P97496 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC16.62■□□□□ 0.25
Smarcc1P97496 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Smarcc1P97496 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcc1P97496 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC16.62■□□□□ 0.25
Smarcc1P97496 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcc1P97496 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcc1P97496 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC16.62■□□□□ 0.25
Smarcc1P97496 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcc1P97496 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcc1P97496 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcc1P97496 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smarcc1P97496 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Smarcc1P97496 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Smarcc1P97496 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smarcc1P97496 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Smarcc1P97496 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC16.61■□□□□ 0.25
Smarcc1P97496 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smarcc1P97496 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Smarcc1P97496 Gm11439-201ENSMUST00000118598 409 ntBASIC16.61■□□□□ 0.25
Smarcc1P97496 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Smarcc1P97496 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Smarcc1P97496 Gm32025-201ENSMUST00000217960 307 ntBASIC16.61■□□□□ 0.25
Smarcc1P97496 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smarcc1P97496 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Smarcc1P97496 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Smarcc1P97496 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smarcc1P97496 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Smarcc1P97496 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smarcc1P97496 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Smarcc1P97496 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Smarcc1P97496 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Smarcc1P97496 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smarcc1P97496 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC16.61■□□□□ 0.25
Smarcc1P97496 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smarcc1P97496 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Smarcc1P97496 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Smarcc1P97496 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smarcc1P97496 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Smarcc1P97496 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smarcc1P97496 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smarcc1P97496 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smarcc1P97496 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smarcc1P97496 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smarcc1P97496 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smarcc1P97496 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC16.6■□□□□ 0.25
Smarcc1P97496 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Smarcc1P97496 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Smarcc1P97496 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC16.6■□□□□ 0.25
Smarcc1P97496 Mir5120-201ENSMUST00000175020 78 ntBASIC16.6■□□□□ 0.25
Smarcc1P97496 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Smarcc1P97496 Gm44967-201ENSMUST00000207047 631 ntBASIC16.6■□□□□ 0.25
Smarcc1P97496 Abhd11os-203ENSMUST00000222613 363 ntBASIC16.6■□□□□ 0.25
Smarcc1P97496 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smarcc1P97496 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smarcc1P97496 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smarcc1P97496 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smarcc1P97496 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smarcc1P97496 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smarcc1P97496 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smarcc1P97496 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Smarcc1P97496 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smarcc1P97496 AC123857.2-201ENSMUST00000225756 1582 ntBASIC16.6■□□□□ 0.25
Smarcc1P97496 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smarcc1P97496 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC16.59■□□□□ 0.25
Smarcc1P97496 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarcc1P97496 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Smarcc1P97496 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarcc1P97496 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Smarcc1P97496 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Smarcc1P97496 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Smarcc1P97496 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
Smarcc1P97496 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarcc1P97496 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Smarcc1P97496 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC16.59■□□□□ 0.25
Smarcc1P97496 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarcc1P97496 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarcc1P97496 Gm4909-201ENSMUST00000118749 794 ntBASIC16.59■□□□□ 0.25
Smarcc1P97496 Gm14277-201ENSMUST00000121195 360 ntBASIC16.59■□□□□ 0.25
Smarcc1P97496 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Smarcc1P97496 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarcc1P97496 Gm13097-201ENSMUST00000210722 397 ntBASIC16.59■□□□□ 0.25
Smarcc1P97496 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC16.59■□□□□ 0.25
Smarcc1P97496 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarcc1P97496 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarcc1P97496 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Smarcc1P97496 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms