Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cacna1aP97445 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Cacna1aP97445 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cacna1aP97445 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.31□□□□□ -0.44
Cacna1aP97445 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cacna1aP97445 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cacna1aP97445 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cacna1aP97445 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cacna1aP97445 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Cacna1aP97445 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cacna1aP97445 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cacna1aP97445 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cacna1aP97445 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Cacna1aP97445 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cacna1aP97445 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cacna1aP97445 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cacna1aP97445 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cacna1aP97445 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cacna1aP97445 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cacna1aP97445 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.31□□□□□ -0.44
Cacna1aP97445 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cacna1aP97445 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Cacna1aP97445 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.3□□□□□ -0.44
Cacna1aP97445 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cacna1aP97445 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cacna1aP97445 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cacna1aP97445 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Cacna1aP97445 Gm43378-201ENSMUST00000199336 582 ntBASIC12.3□□□□□ -0.44
Cacna1aP97445 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.3□□□□□ -0.44
Cacna1aP97445 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.3□□□□□ -0.44
Cacna1aP97445 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cacna1aP97445 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cacna1aP97445 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cacna1aP97445 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cacna1aP97445 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cacna1aP97445 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.3□□□□□ -0.44
Cacna1aP97445 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cacna1aP97445 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Cacna1aP97445 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cacna1aP97445 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cacna1aP97445 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Cacna1aP97445 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Cacna1aP97445 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cacna1aP97445 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cacna1aP97445 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Cacna1aP97445 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.3□□□□□ -0.44
Cacna1aP97445 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cacna1aP97445 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cacna1aP97445 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Cacna1aP97445 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC12.3□□□□□ -0.44
Cacna1aP97445 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.3□□□□□ -0.44
Cacna1aP97445 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.3□□□□□ -0.44
Cacna1aP97445 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC12.3□□□□□ -0.44
Cacna1aP97445 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cacna1aP97445 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cacna1aP97445 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cacna1aP97445 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cacna1aP97445 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.3□□□□□ -0.44
Cacna1aP97445 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cacna1aP97445 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.3□□□□□ -0.44
Cacna1aP97445 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cacna1aP97445 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cacna1aP97445 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cacna1aP97445 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cacna1aP97445 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cacna1aP97445 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cacna1aP97445 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cacna1aP97445 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cacna1aP97445 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cacna1aP97445 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cacna1aP97445 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cacna1aP97445 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cacna1aP97445 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cacna1aP97445 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.3□□□□□ -0.44
Cacna1aP97445 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cacna1aP97445 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cacna1aP97445 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cacna1aP97445 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cacna1aP97445 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cacna1aP97445 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cacna1aP97445 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cacna1aP97445 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Cacna1aP97445 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.29□□□□□ -0.44
Cacna1aP97445 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC12.29□□□□□ -0.44
Cacna1aP97445 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cacna1aP97445 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Cacna1aP97445 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cacna1aP97445 Gm5051-201ENSMUST00000204085 485 ntBASIC12.29□□□□□ -0.44
Cacna1aP97445 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cacna1aP97445 Gm44545-201ENSMUST00000208262 746 ntBASIC12.29□□□□□ -0.44
Cacna1aP97445 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.29□□□□□ -0.44
Cacna1aP97445 Gm14267-206ENSMUST00000226870 1209 ntBASIC12.29□□□□□ -0.44
Cacna1aP97445 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Cacna1aP97445 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Cacna1aP97445 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cacna1aP97445 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cacna1aP97445 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cacna1aP97445 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Cacna1aP97445 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cacna1aP97445 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms