Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx2-3P97334 Gm19221-201ENSMUST00000221827 1477 ntBASIC16.62■□□□□ 0.25
Nkx2-3P97334 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC16.62■□□□□ 0.25
Nkx2-3P97334 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx2-3P97334 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Nkx2-3P97334 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx2-3P97334 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx2-3P97334 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Nkx2-3P97334 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx2-3P97334 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx2-3P97334 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Nkx2-3P97334 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx2-3P97334 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx2-3P97334 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC16.62■□□□□ 0.25
Nkx2-3P97334 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx2-3P97334 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx2-3P97334 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx2-3P97334 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx2-3P97334 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx2-3P97334 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx2-3P97334 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx2-3P97334 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx2-3P97334 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx2-3P97334 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Nkx2-3P97334 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx2-3P97334 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx2-3P97334 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx2-3P97334 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx2-3P97334 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC16.61■□□□□ 0.25
Nkx2-3P97334 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx2-3P97334 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC16.61■□□□□ 0.25
Nkx2-3P97334 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC16.61■□□□□ 0.25
Nkx2-3P97334 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx2-3P97334 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx2-3P97334 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Nkx2-3P97334 Gm16505-201ENSMUST00000179981 232 ntBASIC16.61■□□□□ 0.25
Nkx2-3P97334 Gm4819-201ENSMUST00000182170 1009 ntBASIC16.61■□□□□ 0.25
Nkx2-3P97334 Gm9061-201ENSMUST00000182707 1006 ntBASIC16.61■□□□□ 0.25
Nkx2-3P97334 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC16.61■□□□□ 0.25
Nkx2-3P97334 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx2-3P97334 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx2-3P97334 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx2-3P97334 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx2-3P97334 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx2-3P97334 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx2-3P97334 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx2-3P97334 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx2-3P97334 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx2-3P97334 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx2-3P97334 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx2-3P97334 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx2-3P97334 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx2-3P97334 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx2-3P97334 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx2-3P97334 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx2-3P97334 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx2-3P97334 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx2-3P97334 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx2-3P97334 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx2-3P97334 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx2-3P97334 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx2-3P97334 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx2-3P97334 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Nkx2-3P97334 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx2-3P97334 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx2-3P97334 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Nkx2-3P97334 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx2-3P97334 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx2-3P97334 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx2-3P97334 Gm24830-201ENSMUST00000102024 166 ntBASIC16.6■□□□□ 0.25
Nkx2-3P97334 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx2-3P97334 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC16.6■□□□□ 0.25
Nkx2-3P97334 Gm25890-201ENSMUST00000177643 165 ntBASIC16.6■□□□□ 0.25
Nkx2-3P97334 Rnu1b2-201ENSMUST00000178073 165 ntBASIC16.6■□□□□ 0.25
Nkx2-3P97334 Rnu1b1-201ENSMUST00000178250 165 ntBASIC16.6■□□□□ 0.25
Nkx2-3P97334 Gm22614-201ENSMUST00000178300 165 ntBASIC16.6■□□□□ 0.25
Nkx2-3P97334 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx2-3P97334 Mir7221-201ENSMUST00000184009 72 ntBASIC16.6■□□□□ 0.25
Nkx2-3P97334 Gm18916-201ENSMUST00000198264 1246 ntBASIC16.6■□□□□ 0.25
Nkx2-3P97334 Gm22042-201ENSMUST00000082989 165 ntBASIC16.6■□□□□ 0.25
Nkx2-3P97334 Gm26232-201ENSMUST00000083360 166 ntBASIC16.6■□□□□ 0.25
Nkx2-3P97334 Gm24136-201ENSMUST00000083374 165 ntBASIC16.6■□□□□ 0.25
Nkx2-3P97334 Rnu1b6-201ENSMUST00000083839 166 ntBASIC16.6■□□□□ 0.25
Nkx2-3P97334 Gm26110-201ENSMUST00000083971 165 ntBASIC16.6■□□□□ 0.25
Nkx2-3P97334 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC16.6■□□□□ 0.25
Nkx2-3P97334 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx2-3P97334 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx2-3P97334 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx2-3P97334 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx2-3P97334 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Nkx2-3P97334 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx2-3P97334 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx2-3P97334 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx2-3P97334 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx2-3P97334 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx2-3P97334 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nkx2-3P97334 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nkx2-3P97334 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nkx2-3P97334 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nkx2-3P97334 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms