Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43bP86448 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.73□□□□□ -0.21
Trim43bP86448 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
Trim43bP86448 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.73□□□□□ -0.21
Trim43bP86448 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43bP86448 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43bP86448 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43bP86448 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43bP86448 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trim43bP86448 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43bP86448 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43bP86448 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43bP86448 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13.73□□□□□ -0.21
Trim43bP86448 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43bP86448 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Trim43bP86448 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43bP86448 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43bP86448 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43bP86448 Gm29667-201ENSMUST00000190817 490 ntBASIC13.73□□□□□ -0.21
Trim43bP86448 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43bP86448 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.73□□□□□ -0.21
Trim43bP86448 Gm6916-202ENSMUST00000205523 195 ntBASIC13.73□□□□□ -0.21
Trim43bP86448 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.73□□□□□ -0.21
Trim43bP86448 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43bP86448 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.73□□□□□ -0.21
Trim43bP86448 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43bP86448 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43bP86448 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43bP86448 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43bP86448 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43bP86448 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43bP86448 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43bP86448 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43bP86448 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43bP86448 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43bP86448 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.73□□□□□ -0.21
Trim43bP86448 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43bP86448 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43bP86448 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43bP86448 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43bP86448 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Trim43bP86448 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trim43bP86448 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trim43bP86448 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trim43bP86448 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trim43bP86448 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.73□□□□□ -0.21
Trim43bP86448 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trim43bP86448 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.72□□□□□ -0.21
Trim43bP86448 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
Trim43bP86448 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43bP86448 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43bP86448 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43bP86448 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trim43bP86448 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43bP86448 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43bP86448 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43bP86448 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43bP86448 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43bP86448 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43bP86448 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Trim43bP86448 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43bP86448 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Trim43bP86448 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.72□□□□□ -0.21
Trim43bP86448 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
Trim43bP86448 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.72□□□□□ -0.21
Trim43bP86448 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.72□□□□□ -0.21
Trim43bP86448 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43bP86448 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.72□□□□□ -0.21
Trim43bP86448 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.72□□□□□ -0.21
Trim43bP86448 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.72□□□□□ -0.21
Trim43bP86448 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.72□□□□□ -0.21
Trim43bP86448 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43bP86448 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trim43bP86448 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43bP86448 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43bP86448 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trim43bP86448 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43bP86448 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43bP86448 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Trim43bP86448 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.72□□□□□ -0.21
Trim43bP86448 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43bP86448 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43bP86448 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43bP86448 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43bP86448 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.72□□□□□ -0.21
Trim43bP86448 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Trim43bP86448 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43bP86448 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43bP86448 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Trim43bP86448 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim43bP86448 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim43bP86448 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Trim43bP86448 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.71□□□□□ -0.21
Trim43bP86448 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim43bP86448 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim43bP86448 Gm15460-201ENSMUST00000118147 391 ntBASIC13.71□□□□□ -0.21
Trim43bP86448 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.71□□□□□ -0.21
Trim43bP86448 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim43bP86448 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim43bP86448 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms