Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Gm5866-201ENSMUST00000177881 973 ntBASIC11.77□□□□□ -0.53
Sec61a1P61620 AC132863.2-201ENSMUST00000226643 799 ntBASIC11.77□□□□□ -0.53
Sec61a1P61620 Wdyhv1-206ENSMUST00000227142 786 ntBASIC11.77□□□□□ -0.53
Sec61a1P61620 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sec61a1P61620 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Sec61a1P61620 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sec61a1P61620 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sec61a1P61620 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sec61a1P61620 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sec61a1P61620 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sec61a1P61620 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sec61a1P61620 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.77□□□□□ -0.53
Sec61a1P61620 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.77□□□□□ -0.53
Sec61a1P61620 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC11.77□□□□□ -0.53
Sec61a1P61620 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sec61a1P61620 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sec61a1P61620 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sec61a1P61620 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sec61a1P61620 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sec61a1P61620 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sec61a1P61620 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sec61a1P61620 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sec61a1P61620 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sec61a1P61620 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sec61a1P61620 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sec61a1P61620 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sec61a1P61620 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sec61a1P61620 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Sec61a1P61620 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Sec61a1P61620 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sec61a1P61620 BC001981-202ENSMUST00000191393 1545 ntBASIC11.76□□□□□ -0.53
Sec61a1P61620 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sec61a1P61620 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sec61a1P61620 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sec61a1P61620 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Sec61a1P61620 Gm9347-201ENSMUST00000211473 1607 ntBASIC11.76□□□□□ -0.53
Sec61a1P61620 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sec61a1P61620 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Sec61a1P61620 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sec61a1P61620 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Sec61a1P61620 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sec61a1P61620 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sec61a1P61620 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sec61a1P61620 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC11.76□□□□□ -0.53
Sec61a1P61620 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Sec61a1P61620 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sec61a1P61620 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sec61a1P61620 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Sec61a1P61620 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Sec61a1P61620 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sec61a1P61620 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sec61a1P61620 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.76□□□□□ -0.53
Sec61a1P61620 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sec61a1P61620 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sec61a1P61620 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sec61a1P61620 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.76□□□□□ -0.53
Sec61a1P61620 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Sec61a1P61620 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sec61a1P61620 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sec61a1P61620 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sec61a1P61620 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Sec61a1P61620 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC11.76□□□□□ -0.53
Sec61a1P61620 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sec61a1P61620 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sec61a1P61620 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sec61a1P61620 Paupar-201ENSMUST00000194826 3482 ntBASIC11.76□□□□□ -0.53
Sec61a1P61620 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sec61a1P61620 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sec61a1P61620 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.75□□□□□ -0.53
Sec61a1P61620 Gm44891-201ENSMUST00000208817 2223 ntBASIC11.75□□□□□ -0.53
Sec61a1P61620 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sec61a1P61620 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sec61a1P61620 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sec61a1P61620 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sec61a1P61620 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sec61a1P61620 Gm5939-201ENSMUST00000119613 2874 ntBASIC11.75□□□□□ -0.53
Sec61a1P61620 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sec61a1P61620 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC11.75□□□□□ -0.53
Sec61a1P61620 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sec61a1P61620 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Sec61a1P61620 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC11.75□□□□□ -0.53
Sec61a1P61620 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sec61a1P61620 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.75□□□□□ -0.53
Sec61a1P61620 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sec61a1P61620 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sec61a1P61620 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sec61a1P61620 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sec61a1P61620 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sec61a1P61620 Gm27838-201ENSMUST00000184829 128 ntBASIC11.75□□□□□ -0.53
Sec61a1P61620 AA619741-201ENSMUST00000195095 646 ntBASIC11.75□□□□□ -0.53
Sec61a1P61620 Gm6916-202ENSMUST00000205523 195 ntBASIC11.75□□□□□ -0.53
Sec61a1P61620 Gm44855-201ENSMUST00000205725 362 ntBASIC11.75□□□□□ -0.53
Sec61a1P61620 Gm44608-201ENSMUST00000206827 855 ntBASIC11.75□□□□□ -0.53
Sec61a1P61620 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sec61a1P61620 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.75□□□□□ -0.53
Sec61a1P61620 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.75□□□□□ -0.53
Sec61a1P61620 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Sec61a1P61620 Syt7-204ENSMUST00000223586 1344 ntBASIC11.75□□□□□ -0.53
Sec61a1P61620 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.75□□□□□ -0.53
Sec61a1P61620 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms