Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.59□□□□□ -0.39
Nup43P59235 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Nup43P59235 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.59□□□□□ -0.39
Nup43P59235 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.59□□□□□ -0.39
Nup43P59235 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.59□□□□□ -0.39
Nup43P59235 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup43P59235 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.59□□□□□ -0.39
Nup43P59235 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup43P59235 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nup43P59235 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.59□□□□□ -0.39
Nup43P59235 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.59□□□□□ -0.39
Nup43P59235 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.59□□□□□ -0.39
Nup43P59235 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.59□□□□□ -0.39
Nup43P59235 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup43P59235 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup43P59235 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup43P59235 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup43P59235 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Nup43P59235 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.59□□□□□ -0.39
Nup43P59235 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup43P59235 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup43P59235 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup43P59235 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup43P59235 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nup43P59235 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup43P59235 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup43P59235 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup43P59235 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nup43P59235 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.39
Nup43P59235 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Nup43P59235 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Nup43P59235 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nup43P59235 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nup43P59235 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nup43P59235 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nup43P59235 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.58□□□□□ -0.4
Nup43P59235 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.58□□□□□ -0.4
Nup43P59235 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.58□□□□□ -0.4
Nup43P59235 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nup43P59235 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.58□□□□□ -0.4
Nup43P59235 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nup43P59235 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nup43P59235 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Nup43P59235 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nup43P59235 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Nup43P59235 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.58□□□□□ -0.4
Nup43P59235 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nup43P59235 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.58□□□□□ -0.4
Nup43P59235 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.58□□□□□ -0.4
Nup43P59235 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nup43P59235 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.58□□□□□ -0.4
Nup43P59235 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nup43P59235 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nup43P59235 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nup43P59235 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Nup43P59235 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nup43P59235 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nup43P59235 Gm18473-201ENSMUST00000220543 868 ntBASIC12.58□□□□□ -0.4
Nup43P59235 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nup43P59235 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nup43P59235 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nup43P59235 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nup43P59235 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nup43P59235 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nup43P59235 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nup43P59235 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nup43P59235 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nup43P59235 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nup43P59235 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nup43P59235 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nup43P59235 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nup43P59235 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Nup43P59235 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nup43P59235 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.57□□□□□ -0.4
Nup43P59235 Gm11478-201ENSMUST00000117851 599 ntBASIC12.57□□□□□ -0.4
Nup43P59235 Gm5687-201ENSMUST00000118252 640 ntBASIC12.57□□□□□ -0.4
Nup43P59235 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nup43P59235 Gm15806-201ENSMUST00000120696 955 ntBASIC12.57□□□□□ -0.4
Nup43P59235 Gm6152-201ENSMUST00000151704 340 ntBASIC12.57□□□□□ -0.4
Nup43P59235 Gm9002-201ENSMUST00000178437 499 ntBASIC12.57□□□□□ -0.4
Nup43P59235 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Nup43P59235 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nup43P59235 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nup43P59235 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nup43P59235 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Nup43P59235 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nup43P59235 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Nup43P59235 Gm5356-201ENSMUST00000093326 615 ntBASIC12.57□□□□□ -0.4
Nup43P59235 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nup43P59235 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.57□□□□□ -0.4
Nup43P59235 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Nup43P59235 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nup43P59235 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nup43P59235 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nup43P59235 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nup43P59235 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Nup43P59235 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nup43P59235 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nup43P59235 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nup43P59235 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms