Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.63□□□□□ -0.23
Tubgcp3P58854 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.63□□□□□ -0.23
Tubgcp3P58854 Gm7730-201ENSMUST00000212486 454 ntBASIC13.63□□□□□ -0.23
Tubgcp3P58854 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Tubgcp3P58854 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tubgcp3P58854 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tubgcp3P58854 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Tubgcp3P58854 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tubgcp3P58854 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tubgcp3P58854 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tubgcp3P58854 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.63□□□□□ -0.23
Tubgcp3P58854 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tubgcp3P58854 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Tubgcp3P58854 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tubgcp3P58854 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tubgcp3P58854 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Tubgcp3P58854 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Tubgcp3P58854 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tubgcp3P58854 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tubgcp3P58854 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Tubgcp3P58854 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tubgcp3P58854 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tubgcp3P58854 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tubgcp3P58854 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Tubgcp3P58854 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tubgcp3P58854 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.62□□□□□ -0.23
Tubgcp3P58854 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tubgcp3P58854 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Tubgcp3P58854 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tubgcp3P58854 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tubgcp3P58854 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.62□□□□□ -0.23
Tubgcp3P58854 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tubgcp3P58854 Gm15678-201ENSMUST00000117573 960 ntBASIC13.62□□□□□ -0.23
Tubgcp3P58854 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Tubgcp3P58854 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.62□□□□□ -0.23
Tubgcp3P58854 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.62□□□□□ -0.23
Tubgcp3P58854 Gm6218-201ENSMUST00000219812 628 ntBASIC13.62□□□□□ -0.23
Tubgcp3P58854 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tubgcp3P58854 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Tubgcp3P58854 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tubgcp3P58854 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tubgcp3P58854 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tubgcp3P58854 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tubgcp3P58854 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Tubgcp3P58854 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Tubgcp3P58854 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.62□□□□□ -0.23
Tubgcp3P58854 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tubgcp3P58854 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tubgcp3P58854 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Tubgcp3P58854 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tubgcp3P58854 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tubgcp3P58854 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tubgcp3P58854 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tubgcp3P58854 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tubgcp3P58854 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tubgcp3P58854 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tubgcp3P58854 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.61□□□□□ -0.23
Tubgcp3P58854 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.61□□□□□ -0.23
Tubgcp3P58854 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
Tubgcp3P58854 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tubgcp3P58854 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tubgcp3P58854 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Tubgcp3P58854 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Tubgcp3P58854 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.61□□□□□ -0.23
Tubgcp3P58854 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tubgcp3P58854 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tubgcp3P58854 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Tubgcp3P58854 Gm44855-201ENSMUST00000205725 362 ntBASIC13.61□□□□□ -0.23
Tubgcp3P58854 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.61□□□□□ -0.23
Tubgcp3P58854 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.61□□□□□ -0.23
Tubgcp3P58854 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tubgcp3P58854 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tubgcp3P58854 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tubgcp3P58854 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tubgcp3P58854 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tubgcp3P58854 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tubgcp3P58854 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tubgcp3P58854 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tubgcp3P58854 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tubgcp3P58854 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Tubgcp3P58854 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tubgcp3P58854 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Tubgcp3P58854 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tubgcp3P58854 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tubgcp3P58854 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tubgcp3P58854 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tubgcp3P58854 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tubgcp3P58854 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tubgcp3P58854 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tubgcp3P58854 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tubgcp3P58854 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tubgcp3P58854 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Tubgcp3P58854 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tubgcp3P58854 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Tubgcp3P58854 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.6□□□□□ -0.23
Tubgcp3P58854 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tubgcp3P58854 Auts2-212ENSMUST00000178555 309 ntBASIC13.6□□□□□ -0.23
Tubgcp3P58854 Gm5354-201ENSMUST00000182417 973 ntBASIC13.6□□□□□ -0.23
Tubgcp3P58854 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.6□□□□□ -0.23
Tubgcp3P58854 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 113.5 ms