Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nub1P54729 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Nub1P54729 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC14.37□□□□□ -0.11
Nub1P54729 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nub1P54729 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Nub1P54729 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nub1P54729 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nub1P54729 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Nub1P54729 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.37□□□□□ -0.11
Nub1P54729 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Nub1P54729 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nub1P54729 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nub1P54729 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Nub1P54729 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nub1P54729 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.37□□□□□ -0.11
Nub1P54729 Tmed9-203ENSMUST00000224741 1450 ntBASIC14.37□□□□□ -0.11
Nub1P54729 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nub1P54729 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.37□□□□□ -0.11
Nub1P54729 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nub1P54729 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nub1P54729 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nub1P54729 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nub1P54729 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nub1P54729 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Nub1P54729 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nub1P54729 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nub1P54729 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nub1P54729 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC14.36□□□□□ -0.11
Nub1P54729 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nub1P54729 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nub1P54729 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nub1P54729 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nub1P54729 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Nub1P54729 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Nub1P54729 Rab3c-202ENSMUST00000223922 2398 ntBASIC14.36□□□□□ -0.11
Nub1P54729 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nub1P54729 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nub1P54729 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nub1P54729 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nub1P54729 Gm45384-201ENSMUST00000210451 277 ntBASIC14.36□□□□□ -0.11
Nub1P54729 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.36□□□□□ -0.11
Nub1P54729 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nub1P54729 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Nub1P54729 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nub1P54729 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nub1P54729 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nub1P54729 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.36□□□□□ -0.11
Nub1P54729 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nub1P54729 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nub1P54729 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.36□□□□□ -0.11
Nub1P54729 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC14.36□□□□□ -0.11
Nub1P54729 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Nub1P54729 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nub1P54729 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.36□□□□□ -0.11
Nub1P54729 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nub1P54729 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nub1P54729 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC14.35□□□□□ -0.11
Nub1P54729 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nub1P54729 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nub1P54729 Gm43868-201ENSMUST00000205187 2114 ntBASIC14.35□□□□□ -0.11
Nub1P54729 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nub1P54729 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nub1P54729 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nub1P54729 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nub1P54729 Gm12138-201ENSMUST00000122180 951 ntBASIC14.35□□□□□ -0.11
Nub1P54729 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.35□□□□□ -0.11
Nub1P54729 Gm15429-201ENSMUST00000151268 798 ntBASIC14.35□□□□□ -0.11
Nub1P54729 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Nub1P54729 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.35□□□□□ -0.11
Nub1P54729 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Nub1P54729 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nub1P54729 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nub1P54729 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.35□□□□□ -0.11
Nub1P54729 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nub1P54729 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nub1P54729 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nub1P54729 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nub1P54729 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.35□□□□□ -0.11
Nub1P54729 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nub1P54729 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nub1P54729 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC14.35□□□□□ -0.11
Nub1P54729 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nub1P54729 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nub1P54729 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nub1P54729 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nub1P54729 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nub1P54729 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nub1P54729 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nub1P54729 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nub1P54729 Gm4782-201ENSMUST00000168705 2046 ntBASIC14.34□□□□□ -0.11
Nub1P54729 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nub1P54729 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nub1P54729 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nub1P54729 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nub1P54729 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nub1P54729 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nub1P54729 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nub1P54729 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nub1P54729 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.34□□□□□ -0.11
Nub1P54729 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms