Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sox1P53783 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sox1P53783 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox1P53783 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Sox1P53783 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox1P53783 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox1P53783 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox1P53783 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sox1P53783 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC13.56□□□□□ -0.24
Sox1P53783 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Sox1P53783 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Sox1P53783 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sox1P53783 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Sox1P53783 Gm13875-201ENSMUST00000120162 282 ntBASIC13.56□□□□□ -0.24
Sox1P53783 Gm12266-201ENSMUST00000120311 962 ntBASIC13.56□□□□□ -0.24
Sox1P53783 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC13.56□□□□□ -0.24
Sox1P53783 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC13.56□□□□□ -0.24
Sox1P53783 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sox1P53783 Ighv5-7-201ENSMUST00000192302 244 ntBASIC13.56□□□□□ -0.24
Sox1P53783 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sox1P53783 Gm19287-201ENSMUST00000203190 358 ntBASIC13.56□□□□□ -0.24
Sox1P53783 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.56□□□□□ -0.24
Sox1P53783 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox1P53783 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox1P53783 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox1P53783 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox1P53783 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox1P53783 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sox1P53783 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Sox1P53783 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
Sox1P53783 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Sox1P53783 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sox1P53783 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Sox1P53783 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox1P53783 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox1P53783 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox1P53783 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Sox1P53783 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox1P53783 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sox1P53783 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox1P53783 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox1P53783 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.55□□□□□ -0.24
Sox1P53783 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox1P53783 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox1P53783 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC13.55□□□□□ -0.24
Sox1P53783 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox1P53783 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox1P53783 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox1P53783 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sox1P53783 Gm13045-201ENSMUST00000119019 712 ntBASIC13.55□□□□□ -0.24
Sox1P53783 Gm14460-201ENSMUST00000121511 639 ntBASIC13.55□□□□□ -0.24
Sox1P53783 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC13.55□□□□□ -0.24
Sox1P53783 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC13.55□□□□□ -0.24
Sox1P53783 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox1P53783 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC13.55□□□□□ -0.24
Sox1P53783 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Sox1P53783 Gm5732-201ENSMUST00000182596 1007 ntBASIC13.55□□□□□ -0.24
Sox1P53783 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC13.55□□□□□ -0.24
Sox1P53783 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC13.55□□□□□ -0.24
Sox1P53783 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.55□□□□□ -0.24
Sox1P53783 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC13.55□□□□□ -0.24
Sox1P53783 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC13.55□□□□□ -0.24
Sox1P53783 Gm32025-201ENSMUST00000217960 307 ntBASIC13.55□□□□□ -0.24
Sox1P53783 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.55□□□□□ -0.24
Sox1P53783 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox1P53783 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox1P53783 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Sox1P53783 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox1P53783 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sox1P53783 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox1P53783 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sox1P53783 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Sox1P53783 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox1P53783 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Sox1P53783 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Sox1P53783 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox1P53783 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox1P53783 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox1P53783 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox1P53783 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.55□□□□□ -0.24
Sox1P53783 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sox1P53783 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox1P53783 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox1P53783 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Sox1P53783 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox1P53783 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox1P53783 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.54□□□□□ -0.24
Sox1P53783 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.54□□□□□ -0.24
Sox1P53783 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox1P53783 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox1P53783 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.54□□□□□ -0.24
Sox1P53783 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sox1P53783 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.54□□□□□ -0.24
Sox1P53783 Gm45495-201ENSMUST00000200940 1700 ntBASIC13.54□□□□□ -0.24
Sox1P53783 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox1P53783 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox1P53783 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Sox1P53783 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC13.54□□□□□ -0.24
Sox1P53783 Gm10051-201ENSMUST00000145209 414 ntBASIC13.54□□□□□ -0.24
Sox1P53783 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms