Protein–RNA interactions for Protein: P52194

Clgn, Calmegin, mousemouse

Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClgnP52194 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClgnP52194 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
ClgnP52194 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClgnP52194 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClgnP52194 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClgnP52194 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClgnP52194 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ClgnP52194 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
ClgnP52194 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClgnP52194 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClgnP52194 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClgnP52194 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClgnP52194 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClgnP52194 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClgnP52194 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClgnP52194 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClgnP52194 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClgnP52194 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.62□□□□□ -0.23
ClgnP52194 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ClgnP52194 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ClgnP52194 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClgnP52194 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClgnP52194 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ClgnP52194 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ClgnP52194 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClgnP52194 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ClgnP52194 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC13.62□□□□□ -0.23
ClgnP52194 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ClgnP52194 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ClgnP52194 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClgnP52194 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClgnP52194 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.62□□□□□ -0.23
ClgnP52194 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.62□□□□□ -0.23
ClgnP52194 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.62□□□□□ -0.23
ClgnP52194 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClgnP52194 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.62□□□□□ -0.23
ClgnP52194 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ClgnP52194 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.62□□□□□ -0.23
ClgnP52194 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
ClgnP52194 Gm20949-201ENSMUST00000206478 952 ntBASIC13.62□□□□□ -0.23
ClgnP52194 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.62□□□□□ -0.23
ClgnP52194 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.62□□□□□ -0.23
ClgnP52194 Gm17795-201ENSMUST00000214505 757 ntBASIC13.62□□□□□ -0.23
ClgnP52194 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ClgnP52194 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClgnP52194 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
ClgnP52194 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClgnP52194 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClgnP52194 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
ClgnP52194 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClgnP52194 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ClgnP52194 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.62□□□□□ -0.23
ClgnP52194 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
ClgnP52194 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClgnP52194 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClgnP52194 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ClgnP52194 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClgnP52194 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.62□□□□□ -0.23
ClgnP52194 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClgnP52194 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
ClgnP52194 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClgnP52194 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClgnP52194 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClgnP52194 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClgnP52194 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClgnP52194 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ClgnP52194 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
ClgnP52194 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ClgnP52194 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ClgnP52194 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ClgnP52194 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ClgnP52194 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ClgnP52194 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ClgnP52194 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.61□□□□□ -0.23
ClgnP52194 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.61□□□□□ -0.23
ClgnP52194 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ClgnP52194 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.61□□□□□ -0.23
ClgnP52194 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ClgnP52194 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ClgnP52194 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ClgnP52194 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
ClgnP52194 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
ClgnP52194 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
ClgnP52194 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
ClgnP52194 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
ClgnP52194 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ClgnP52194 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ClgnP52194 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.61□□□□□ -0.23
ClgnP52194 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ClgnP52194 Gm29667-201ENSMUST00000190817 490 ntBASIC13.61□□□□□ -0.23
ClgnP52194 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.61□□□□□ -0.23
ClgnP52194 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ClgnP52194 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.61□□□□□ -0.23
ClgnP52194 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ClgnP52194 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.61□□□□□ -0.23
ClgnP52194 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
ClgnP52194 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ClgnP52194 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
ClgnP52194 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ClgnP52194 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms