Protein–RNA interactions for Protein: P50404

Sftpd, Pulmonary surfactant-associated protein D, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpdP50404 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.03□□□□□ -0.16
SftpdP50404 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SftpdP50404 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SftpdP50404 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SftpdP50404 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SftpdP50404 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SftpdP50404 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SftpdP50404 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SftpdP50404 Gm11918-201ENSMUST00000121660 179 ntBASIC14.03□□□□□ -0.16
SftpdP50404 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SftpdP50404 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SftpdP50404 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.03□□□□□ -0.16
SftpdP50404 AC150560.1-201ENSMUST00000227731 1187 ntBASIC14.03□□□□□ -0.16
SftpdP50404 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SftpdP50404 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SftpdP50404 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SftpdP50404 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SftpdP50404 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SftpdP50404 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SftpdP50404 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SftpdP50404 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
SftpdP50404 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC14.03□□□□□ -0.16
SftpdP50404 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SftpdP50404 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SftpdP50404 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SftpdP50404 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SftpdP50404 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SftpdP50404 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
SftpdP50404 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SftpdP50404 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SftpdP50404 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SftpdP50404 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
SftpdP50404 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
SftpdP50404 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.03□□□□□ -0.16
SftpdP50404 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SftpdP50404 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SftpdP50404 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SftpdP50404 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SftpdP50404 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SftpdP50404 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SftpdP50404 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
SftpdP50404 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SftpdP50404 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.16
SftpdP50404 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SftpdP50404 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SftpdP50404 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SftpdP50404 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SftpdP50404 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SftpdP50404 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SftpdP50404 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SftpdP50404 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SftpdP50404 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SftpdP50404 Gm12928-201ENSMUST00000117115 573 ntBASIC14.02□□□□□ -0.17
SftpdP50404 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SftpdP50404 Ighv5-13-201ENSMUST00000193550 290 ntBASIC14.02□□□□□ -0.17
SftpdP50404 Gm9794-201ENSMUST00000202370 423 ntBASIC14.02□□□□□ -0.17
SftpdP50404 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC14.02□□□□□ -0.17
SftpdP50404 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SftpdP50404 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SftpdP50404 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SftpdP50404 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SftpdP50404 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SftpdP50404 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SftpdP50404 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.02□□□□□ -0.17
SftpdP50404 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SftpdP50404 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
SftpdP50404 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SftpdP50404 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SftpdP50404 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SftpdP50404 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SftpdP50404 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SftpdP50404 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.02□□□□□ -0.17
SftpdP50404 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SftpdP50404 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SftpdP50404 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SftpdP50404 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SftpdP50404 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.01□□□□□ -0.17
SftpdP50404 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
SftpdP50404 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.01□□□□□ -0.17
SftpdP50404 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SftpdP50404 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SftpdP50404 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SftpdP50404 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SftpdP50404 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SftpdP50404 AC096628.2-201ENSMUST00000225443 1413 ntBASIC14.01□□□□□ -0.17
SftpdP50404 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SftpdP50404 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SftpdP50404 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SftpdP50404 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC14.01□□□□□ -0.17
SftpdP50404 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
SftpdP50404 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SftpdP50404 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.01□□□□□ -0.17
SftpdP50404 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC14.01□□□□□ -0.17
SftpdP50404 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC14.01□□□□□ -0.17
SftpdP50404 Gm8463-201ENSMUST00000208573 613 ntBASIC14.01□□□□□ -0.17
SftpdP50404 Itm2b-204ENSMUST00000228637 783 ntBASIC14.01□□□□□ -0.17
SftpdP50404 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SftpdP50404 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SftpdP50404 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SftpdP50404 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms