Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rfx3P48381 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.06□□□□□ -0.48
Rfx3P48381 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rfx3P48381 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rfx3P48381 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Rfx3P48381 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Rfx3P48381 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rfx3P48381 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rfx3P48381 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Rfx3P48381 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rfx3P48381 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Rfx3P48381 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.06□□□□□ -0.48
Rfx3P48381 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Rfx3P48381 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Rfx3P48381 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Rfx3P48381 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rfx3P48381 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.06□□□□□ -0.48
Rfx3P48381 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.06□□□□□ -0.48
Rfx3P48381 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.06□□□□□ -0.48
Rfx3P48381 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rfx3P48381 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Rfx3P48381 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rfx3P48381 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rfx3P48381 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rfx3P48381 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rfx3P48381 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.06□□□□□ -0.48
Rfx3P48381 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rfx3P48381 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rfx3P48381 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rfx3P48381 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rfx3P48381 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rfx3P48381 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rfx3P48381 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rfx3P48381 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rfx3P48381 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rfx3P48381 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rfx3P48381 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rfx3P48381 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rfx3P48381 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rfx3P48381 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rfx3P48381 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rfx3P48381 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rfx3P48381 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rfx3P48381 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.05□□□□□ -0.48
Rfx3P48381 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rfx3P48381 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rfx3P48381 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rfx3P48381 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rfx3P48381 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.05□□□□□ -0.48
Rfx3P48381 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rfx3P48381 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rfx3P48381 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rfx3P48381 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Rfx3P48381 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.05□□□□□ -0.48
Rfx3P48381 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.05□□□□□ -0.48
Rfx3P48381 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rfx3P48381 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rfx3P48381 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.05□□□□□ -0.48
Rfx3P48381 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rfx3P48381 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rfx3P48381 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Rfx3P48381 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rfx3P48381 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rfx3P48381 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rfx3P48381 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rfx3P48381 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rfx3P48381 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rfx3P48381 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rfx3P48381 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rfx3P48381 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rfx3P48381 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.05□□□□□ -0.48
Rfx3P48381 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Rfx3P48381 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rfx3P48381 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rfx3P48381 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Rfx3P48381 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.05□□□□□ -0.48
Rfx3P48381 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Rfx3P48381 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rfx3P48381 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfx3P48381 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rfx3P48381 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfx3P48381 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfx3P48381 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfx3P48381 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfx3P48381 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfx3P48381 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfx3P48381 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Rfx3P48381 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Rfx3P48381 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Rfx3P48381 Gm4875-201ENSMUST00000118257 786 ntBASIC12.04□□□□□ -0.48
Rfx3P48381 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rfx3P48381 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.04□□□□□ -0.48
Rfx3P48381 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rfx3P48381 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.04□□□□□ -0.48
Rfx3P48381 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfx3P48381 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfx3P48381 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfx3P48381 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Rfx3P48381 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rfx3P48381 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms